RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 WNT7BP56706 349 aa8.25□□□□□ -1.09
PDLIM1P4-201ENST00000504327 AP1G2O75843 785 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 RFC5P40937 340 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 SH3BP2P78314 561 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 LRRN4Q8WUT4 740 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 BAP1Q92560 729 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
PDLIM1P4-201ENST00000504327 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
PDLIM1P4-201ENST00000504327 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
PDLIM1P4-201ENST00000504327 LCE2BO14633 110 aa8.22□□□□□ -1.09
PDLIM1P4-201ENST00000504327 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
PDLIM1P4-201ENST00000504327 USP17L8P0C7I0 530 aa8.21□□□□□ -1.1
PDLIM1P4-201ENST00000504327 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
PDLIM1P4-201ENST00000504327 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
PDLIM1P4-201ENST00000504327 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
PDLIM1P4-201ENST00000504327 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1P4-201ENST00000504327 PKDCCQ504Y2 493 aa8.19□□□□□ -1.1
PDLIM1P4-201ENST00000504327 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
PDLIM1P4-201ENST00000504327 NR6A1Q15406 480 aa8.18□□□□□ -1.1
PDLIM1P4-201ENST00000504327 SNIP1Q8TAD8 396 aaKnown RBP8.18□□□□□ -1.1
PDLIM1P4-201ENST00000504327 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
PDLIM1P4-201ENST00000504327 DGAT1O75907 488 aa8.17□□□□□ -1.1
PDLIM1P4-201ENST00000504327 EPS8L1Q8TE68 723 aa8.17□□□□□ -1.1
PDLIM1P4-201ENST00000504327 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
PDLIM1P4-201ENST00000504327 J3QL48 77 aa8.16□□□□□ -1.1
PDLIM1P4-201ENST00000504327 SMPD1P17405 629 aa8.16□□□□□ -1.1
PDLIM1P4-201ENST00000504327 TRAF7Q6Q0C0 670 aa8.16□□□□□ -1.1
PDLIM1P4-201ENST00000504327 SIAH2O43255 324 aa8.15□□□□□ -1.1
PDLIM1P4-201ENST00000504327 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
PDLIM1P4-201ENST00000504327 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
PDLIM1P4-201ENST00000504327 NBPF14Q5TI25 921 aa8.15□□□□□ -1.1
PDLIM1P4-201ENST00000504327 ARMC2Q8NEN0 867 aa8.15□□□□□ -1.1
PDLIM1P4-201ENST00000504327 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
PDLIM1P4-201ENST00000504327 VARSP26640 1264 aaKnown RBP8.14□□□□□ -1.11
PDLIM1P4-201ENST00000504327 MYT1Q01538 1121 aa8.14□□□□□ -1.11
PDLIM1P4-201ENST00000504327 AGERQ15109 404 aa8.14□□□□□ -1.11
PDLIM1P4-201ENST00000504327 FKBPLQ9UIM3 349 aa8.14□□□□□ -1.11
PDLIM1P4-201ENST00000504327 ST8SIA5O15466 376 aa8.12□□□□□ -1.11
PDLIM1P4-201ENST00000504327 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
PDLIM1P4-201ENST00000504327 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1P4-201ENST00000504327 TRIM34Q9BYJ4 488 aa8.12□□□□□ -1.11
PDLIM1P4-201ENST00000504327 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 SH3RF1Q7Z6J0 888 aa8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 HPS1Q92902 700 aa8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
PDLIM1P4-201ENST00000504327 AVPP01185 164 aa8.1□□□□□ -1.11
PDLIM1P4-201ENST00000504327 GJD4Q96KN9 370 aaPredicted RBP8.1□□□□□ -1.11
PDLIM1P4-201ENST00000504327 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
PDLIM1P4-201ENST00000504327 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
PDLIM1P4-201ENST00000504327 AAASQ9NRG9 546 aa8.09□□□□□ -1.11
PDLIM1P4-201ENST00000504327 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
PDLIM1P4-201ENST00000504327 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
PDLIM1P4-201ENST00000504327 ZC3H4Q9UPT8 1303 aaKnown RBP8.08□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ARID5BQ14865 1188 aa8.08□□□□□ -1.12
PDLIM1P4-201ENST00000504327 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
PDLIM1P4-201ENST00000504327 BANK1Q8NDB2 785 aa8.08□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
PDLIM1P4-201ENST00000504327 AXIN1O15169 862 aa8.07□□□□□ -1.12
PDLIM1P4-201ENST00000504327 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ADH1CP00326 375 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 NNTQ13423 1086 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ERFEQ4G0M1 354 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 CRIPAKQ8N1N5 446 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 MPNDQ8N594 471 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 CDK15Q96Q40 435 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
PDLIM1P4-201ENST00000504327 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
PDLIM1P4-201ENST00000504327 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
PDLIM1P4-201ENST00000504327 FSHRP23945 695 aa8.04□□□□□ -1.12
PDLIM1P4-201ENST00000504327 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
PDLIM1P4-201ENST00000504327 PTK2Q05397 1052 aa8.04□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ZBTB33Q86T24 672 aa8.04□□□□□ -1.12
PDLIM1P4-201ENST00000504327 GPR37L1O60883 481 aa8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 NR3C2P08235 984 aa8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 VASH1Q7L8A9 365 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 GPSM3Q9Y4H4 160 aa8.03□□□□□ -1.12
PDLIM1P4-201ENST00000504327 SOCS7O14512 581 aa8.02□□□□□ -1.13
PDLIM1P4-201ENST00000504327 GRM5P41594 1212 aa8.02□□□□□ -1.13
PDLIM1P4-201ENST00000504327 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
PDLIM1P4-201ENST00000504327 NDUFB9Q9Y6M9 179 aa8.02□□□□□ -1.13
PDLIM1P4-201ENST00000504327 POTECB2RU33 542 aa8.01□□□□□ -1.13
PDLIM1P4-201ENST00000504327 APBB1O00213 710 aa8□□□□□ -1.13
PDLIM1P4-201ENST00000504327 FBXO45P0C2W1 286 aa8□□□□□ -1.13
PDLIM1P4-201ENST00000504327 TIMP2P16035 220 aa8□□□□□ -1.13
PDLIM1P4-201ENST00000504327 ZBBXA8MT70 800 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 BMP1P13497 986 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 NR5A1Q13285 461 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 MCM6Q14566 821 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 ZNF787Q6DD87 383 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 GMPR2Q9P2T1 348 aaKnown RBP7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 TBC1D2BQ9UPU7 963 aa7.99□□□□□ -1.13
PDLIM1P4-201ENST00000504327 TMEM132AQ24JP5 1023 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms