RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 PABPN1LA6NDY0 278 aaKnown RBP13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 ANKRD30AQ9BXX3 1397 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 SOGA1O94964 1423 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 SEPT10Q9P0V9 454 aa13.23□□□□□ -0.29
AC055713.1-201ENST00000498967 PPP1R12BO60237 982 aaPredicted RBP13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 KIAA1328Q86T90 577 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 SSR1P43307 286 aaKnown RBP13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 FERMT1Q9BQL6 677 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 SWAP70Q9UH65 585 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 PKD2Q13563 968 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 TAF4BQ92750 862 aa13.22□□□□□ -0.29
AC055713.1-201ENST00000498967 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
AC055713.1-201ENST00000498967 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
AC055713.1-201ENST00000498967 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
AC055713.1-201ENST00000498967 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
AC055713.1-201ENST00000498967 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
AC055713.1-201ENST00000498967 SLU7O95391 586 aaKnown RBP13.21□□□□□ -0.3
AC055713.1-201ENST00000498967 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.3
AC055713.1-201ENST00000498967 CCDC102AQ96A19 550 aa13.21□□□□□ -0.3
AC055713.1-201ENST00000498967 AMPHP49418 695 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 RAB3IL1Q8TBN0 382 aa13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
AC055713.1-201ENST00000498967 CCDC192P0DO97 292 aa13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 SERPINC1P01008 464 aa13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 SSX2IPQ9Y2D8 614 aa13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 CLGNO14967 610 aa13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 MKRN1Q9UHC7 482 aaKnown RBP13.19□□□□□ -0.3
AC055713.1-201ENST00000498967 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
AC055713.1-201ENST00000498967 HIP1O00291 1037 aa13.18□□□□□ -0.3
AC055713.1-201ENST00000498967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
AC055713.1-201ENST00000498967 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
AC055713.1-201ENST00000498967 PPP1R9BQ96SB3 815 aa13.17□□□□□ -0.3
AC055713.1-201ENST00000498967 UBXN4Q92575 508 aa13.17□□□□□ -0.3
AC055713.1-201ENST00000498967 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
AC055713.1-201ENST00000498967 TSNARE1Q96NA8 513 aa13.17□□□□□ -0.3
AC055713.1-201ENST00000498967 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 TEFQ10587 303 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 COMMD10Q9Y6G5 202 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 LRRC45Q96CN5 670 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 NUP155O75694 1391 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 PAIP2Q9BPZ3 127 aaKnown RBP13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
AC055713.1-201ENST00000498967 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
AC055713.1-201ENST00000498967 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC158Q5M9N0 1113 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 USH1CQ9Y6N9 552 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 OPA1O60313 960 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
AC055713.1-201ENST00000498967 FAM193AP78312 1265 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 FBF1Q8TES7 1133 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 CEP83Q9Y592 693 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 TANGO6Q9C0B7 1094 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 PDE4AP27815 886 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 GGT6Q6P531 493 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
AC055713.1-201ENST00000498967 SPECC1Q5M775 1068 aa13.11□□□□□ -0.31
AC055713.1-201ENST00000498967 CCDC110Q8TBZ0 833 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms