RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 SH3BP2P78314 561 aa10.5□□□□□ -0.73
RAB3GAP1-206ENST00000497080 SNIP1Q8TAD8 396 aaKnown RBP10.5□□□□□ -0.73
RAB3GAP1-206ENST00000497080 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
RAB3GAP1-206ENST00000497080 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
RAB3GAP1-206ENST00000497080 MAP10Q9P2G4 905 aa10.49□□□□□ -0.73
RAB3GAP1-206ENST00000497080 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
RAB3GAP1-206ENST00000497080 J3QL48 77 aa10.47□□□□□ -0.73
RAB3GAP1-206ENST00000497080 F12P00748 615 aaPredicted RBP10.47□□□□□ -0.73
RAB3GAP1-206ENST00000497080 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
RAB3GAP1-206ENST00000497080 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
RAB3GAP1-206ENST00000497080 SMPD1P17405 629 aa10.46□□□□□ -0.73
RAB3GAP1-206ENST00000497080 CTDSPL2Q05D32 466 aa10.46□□□□□ -0.73
RAB3GAP1-206ENST00000497080 EHBP1Q8NDI1 1231 aa10.46□□□□□ -0.73
RAB3GAP1-206ENST00000497080 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.46□□□□□ -0.73
RAB3GAP1-206ENST00000497080 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
RAB3GAP1-206ENST00000497080 SIAH2O43255 324 aa10.44□□□□□ -0.74
RAB3GAP1-206ENST00000497080 ZNF511Q8NB15 262 aa10.44□□□□□ -0.74
RAB3GAP1-206ENST00000497080 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
RAB3GAP1-206ENST00000497080 ALDH1A1P00352 501 aa10.42□□□□□ -0.74
RAB3GAP1-206ENST00000497080 AVPP01185 164 aa10.42□□□□□ -0.74
RAB3GAP1-206ENST00000497080 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
RAB3GAP1-206ENST00000497080 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
RAB3GAP1-206ENST00000497080 ZNF787Q6DD87 383 aa10.4□□□□□ -0.74
RAB3GAP1-206ENST00000497080 LRRN4Q8WUT4 740 aa10.4□□□□□ -0.74
RAB3GAP1-206ENST00000497080 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
RAB3GAP1-206ENST00000497080 AP1G2O75843 785 aa10.39□□□□□ -0.75
RAB3GAP1-206ENST00000497080 HPS1Q92902 700 aa10.39□□□□□ -0.75
RAB3GAP1-206ENST00000497080 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
RAB3GAP1-206ENST00000497080 AXIN1O15169 862 aa10.38□□□□□ -0.75
RAB3GAP1-206ENST00000497080 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
RAB3GAP1-206ENST00000497080 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
RAB3GAP1-206ENST00000497080 DACH1Q9UI36 760 aa10.38□□□□□ -0.75
RAB3GAP1-206ENST00000497080 POTECB2RU33 542 aa10.37□□□□□ -0.75
RAB3GAP1-206ENST00000497080 AGERQ15109 404 aa10.37□□□□□ -0.75
RAB3GAP1-206ENST00000497080 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
RAB3GAP1-206ENST00000497080 CTC1Q2NKJ3 1217 aa10.36□□□□□ -0.75
RAB3GAP1-206ENST00000497080 ARMC2Q8NEN0 867 aa10.36□□□□□ -0.75
RAB3GAP1-206ENST00000497080 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
RAB3GAP1-206ENST00000497080 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
RAB3GAP1-206ENST00000497080 TLL2Q9Y6L7 1015 aa10.35□□□□□ -0.75
RAB3GAP1-206ENST00000497080 RFC5P40937 340 aa10.34□□□□□ -0.75
RAB3GAP1-206ENST00000497080 C4orf48Q5BLP8 95 aa10.34□□□□□ -0.75
RAB3GAP1-206ENST00000497080 FAM174AQ8TBP5 190 aa10.34□□□□□ -0.75
RAB3GAP1-206ENST00000497080 NR6A1Q15406 480 aa10.33□□□□□ -0.76
RAB3GAP1-206ENST00000497080 BPHLQ86WA6 291 aaPredicted RBP10.33□□□□□ -0.76
RAB3GAP1-206ENST00000497080 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
RAB3GAP1-206ENST00000497080 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
RAB3GAP1-206ENST00000497080 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
RAB3GAP1-206ENST00000497080 MPNDQ8N594 471 aa10.3□□□□□ -0.76
RAB3GAP1-206ENST00000497080 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
RAB3GAP1-206ENST00000497080 EPS8L1Q8TE68 723 aa10.29□□□□□ -0.76
RAB3GAP1-206ENST00000497080 HMX1Q9NP08 348 aaPredicted RBP10.29□□□□□ -0.76
RAB3GAP1-206ENST00000497080 FKBPLQ9UIM3 349 aa10.29□□□□□ -0.76
RAB3GAP1-206ENST00000497080 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
RAB3GAP1-206ENST00000497080 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
RAB3GAP1-206ENST00000497080 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
RAB3GAP1-206ENST00000497080 CDK15Q96Q40 435 aa10.28□□□□□ -0.76
RAB3GAP1-206ENST00000497080 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
RAB3GAP1-206ENST00000497080 GPKOWQ92917 476 aaPredicted RBP eCLIP10.27□□□□□ -0.77
RAB3GAP1-206ENST00000497080 CARD14Q9BXL6 1004 aa10.27□□□□□ -0.77
RAB3GAP1-206ENST00000497080 NNTQ13423 1086 aa10.26□□□□□ -0.77
RAB3GAP1-206ENST00000497080 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
RAB3GAP1-206ENST00000497080 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ADH1CP00326 375 aa10.25□□□□□ -0.77
RAB3GAP1-206ENST00000497080 GRM5P41594 1212 aa10.25□□□□□ -0.77
RAB3GAP1-206ENST00000497080 C1QTNF2Q9BXJ5 285 aa10.25□□□□□ -0.77
RAB3GAP1-206ENST00000497080 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ARHGAP9Q9BRR9 750 aa10.24□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ZNF775Q96BV0 537 aaPredicted RBP10.22□□□□□ -0.77
RAB3GAP1-206ENST00000497080 WDR4P57081 412 aaKnown RBP10.21□□□□□ -0.77
RAB3GAP1-206ENST00000497080 NR5A1Q13285 461 aa10.21□□□□□ -0.77
RAB3GAP1-206ENST00000497080 VASH1Q7L8A9 365 aaPredicted RBP10.21□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
RAB3GAP1-206ENST00000497080 TRIM34Q9BYJ4 488 aa10.21□□□□□ -0.77
RAB3GAP1-206ENST00000497080 ZC3H4Q9UPT8 1303 aaKnown RBP10.21□□□□□ -0.78
RAB3GAP1-206ENST00000497080 NR3C2P08235 984 aa10.2□□□□□ -0.78
RAB3GAP1-206ENST00000497080 PTK2Q05397 1052 aa10.2□□□□□ -0.78
RAB3GAP1-206ENST00000497080 TRMT44Q8IYL2 757 aaKnown RBP10.2□□□□□ -0.78
RAB3GAP1-206ENST00000497080 OCSTAMPQ9BR26 566 aa10.2□□□□□ -0.78
RAB3GAP1-206ENST00000497080 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
RAB3GAP1-206ENST00000497080 BMP1P13497 986 aa10.19□□□□□ -0.78
RAB3GAP1-206ENST00000497080 TIMP2P16035 220 aa10.19□□□□□ -0.78
RAB3GAP1-206ENST00000497080 PNMA1Q8ND90 353 aa10.19□□□□□ -0.78
RAB3GAP1-206ENST00000497080 SNRPBP14678 240 aaKnown RBP10.18□□□□□ -0.78
RAB3GAP1-206ENST00000497080 TRIM46Q7Z4K8 759 aa10.18□□□□□ -0.78
RAB3GAP1-206ENST00000497080 SENP2Q9HC62 589 aa10.18□□□□□ -0.78
RAB3GAP1-206ENST00000497080 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
RAB3GAP1-206ENST00000497080 FSHRP23945 695 aa10.17□□□□□ -0.78
RAB3GAP1-206ENST00000497080 ADAM32Q8TC27 787 aa10.17□□□□□ -0.78
RAB3GAP1-206ENST00000497080 ITPKCQ96DU7 683 aa10.17□□□□□ -0.78
RAB3GAP1-206ENST00000497080 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
RAB3GAP1-206ENST00000497080 GPSM3Q9Y4H4 160 aa10.17□□□□□ -0.78
RAB3GAP1-206ENST00000497080 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
RAB3GAP1-206ENST00000497080 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
RAB3GAP1-206ENST00000497080 GJD4Q96KN9 370 aaPredicted RBP10.16□□□□□ -0.78
RAB3GAP1-206ENST00000497080 TRIM47Q96LD4 638 aa10.16□□□□□ -0.78
RAB3GAP1-206ENST00000497080 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
RAB3GAP1-206ENST00000497080 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms