RNA–Protein interactions for RNA: ENST00000496684.6

CCT3-215, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 2

Gene CCT3, Length 748 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-215	ENST00000496684	FAM98C	Q17RN3	349 aa	Known RBP	11.47	□□□□□ -0.57
CCT3-215	ENST00000496684	ADGRB2	O60241	1585 aa		11.46	□□□□□ -0.57
CCT3-215	ENST00000496684	SBNO1	A3KN83	1393 aa		11.46	□□□□□ -0.57
CCT3-215	ENST00000496684	CAMTA1	Q9Y6Y1	1673 aa		11.46	□□□□□ -0.58
CCT3-215	ENST00000496684	UTRN	P46939	3433 aa		11.45	□□□□□ -0.58
CCT3-215	ENST00000496684	TMEM132E	Q6IEE7	984 aa		11.45	□□□□□ -0.58
CCT3-215	ENST00000496684	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.45	□□□□□ -0.58
CCT3-215	ENST00000496684	PIK3C2G	O75747	1445 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	SPATA31E1	Q6ZUB1	1445 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.44	□□□□□ -0.58
CCT3-215	ENST00000496684		A0A0G2JS52	829 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	YY1	P25490	414 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	HAP1	P54257	671 aa	Predicted RBP	11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	MYT1	Q01538	1121 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	EZH2	Q15910	746 aa	Known RBP	11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	PHF8	Q9UPP1	1060 aa		11.44	□□□□□ -0.58
CCT3-215	ENST00000496684	ARHGEF10	O15013	1369 aa		11.43	□□□□□ -0.58
CCT3-215	ENST00000496684	SPATA31A5	Q5VU36	1347 aa		11.42	□□□□□ -0.58
CCT3-215	ENST00000496684	SPATA31A7	Q8IWB4	1347 aa		11.42	□□□□□ -0.58
CCT3-215	ENST00000496684	CAMKK2	Q96RR4	588 aa		11.42	□□□□□ -0.58
CCT3-215	ENST00000496684	BTG4	Q9NY30	223 aa		11.42	□□□□□ -0.58
CCT3-215	ENST00000496684	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.4	□□□□□ -0.58
CCT3-215	ENST00000496684	PSME1	Q06323	249 aa		11.4	□□□□□ -0.58
CCT3-215	ENST00000496684	LMOD2	Q6P5Q4	547 aa		11.4	□□□□□ -0.58
CCT3-215	ENST00000496684	TRIM37	O94972	964 aa		11.38	□□□□□ -0.59
CCT3-215	ENST00000496684	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.38	□□□□□ -0.59
CCT3-215	ENST00000496684	PMFBP1	Q8TBY8	1022 aa		11.38	□□□□□ -0.59
CCT3-215	ENST00000496684		U3KPZ7	1027 aa	Predicted RBP	11.38	□□□□□ -0.59
CCT3-215	ENST00000496684	CASZ1	Q86V15	1759 aa		11.38	□□□□□ -0.59
CCT3-215	ENST00000496684	ANKRD30B	Q9BXX2	1392 aa		11.38	□□□□□ -0.59
CCT3-215	ENST00000496684	ANKAR	Q7Z5J8	1434 aa		11.37	□□□□□ -0.59
CCT3-215	ENST00000496684	RGL3	Q3MIN7	710 aa		11.37	□□□□□ -0.59
CCT3-215	ENST00000496684	PARD3	Q8TEW0	1356 aa		11.37	□□□□□ -0.59
CCT3-215	ENST00000496684	SIRT1	Q96EB6	747 aa		11.36	□□□□□ -0.59
CCT3-215	ENST00000496684	SBF2	Q86WG5	1849 aa		11.36	□□□□□ -0.59
CCT3-215	ENST00000496684	CEP350	Q5VT06	3117 aa		11.36	□□□□□ -0.59
CCT3-215	ENST00000496684	SPATA31A1	Q5TZJ5	1347 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	PRR36	Q9H6K5	1346 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	DLC1	Q96QB1	1528 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	MYOM1	P52179	1685 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	RGPD4	Q7Z3J3	1758 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	PEAK1	Q9H792	1746 aa		11.35	□□□□□ -0.59
CCT3-215	ENST00000496684	NRK	Q7Z2Y5	1582 aa		11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	APBA3	O96018	575 aa		11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	PRAM1	Q96QH2	718 aa		11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	PARP4	Q9UKK3	1724 aa	Known RBP	11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	TULP4	Q9NRJ4	1543 aa		11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	ACIN1	Q9UKV3	1341 aa	Known RBP	11.34	□□□□□ -0.59
CCT3-215	ENST00000496684	LMO7	Q8WWI1	1683 aa		11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	ADGRB1	O14514	1584 aa		11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	CHD4	Q14839	1912 aa		11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	NINL	Q9Y2I6	1382 aa		11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	FAM196A	Q6ZSG2	479 aa		11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	C14orf93	Q9H972	538 aa	Known RBP	11.33	□□□□□ -0.6
CCT3-215	ENST00000496684	ITSN1	Q15811	1721 aa		11.32	□□□□□ -0.6
CCT3-215	ENST00000496684	KIAA0232	Q92628	1395 aa		11.32	□□□□□ -0.6
CCT3-215	ENST00000496684	CFAP70	Q5T0N1	1121 aa		11.32	□□□□□ -0.6
CCT3-215	ENST00000496684	PRDM11	Q9NQV5	511 aa		11.32	□□□□□ -0.6
CCT3-215	ENST00000496684	CHRNA2	Q15822	529 aa		11.31	□□□□□ -0.6
CCT3-215	ENST00000496684	SSH2	Q76I76	1423 aa		11.3	□□□□□ -0.6
CCT3-215	ENST00000496684	KCNQ2	O43526	872 aa		11.3	□□□□□ -0.6
CCT3-215	ENST00000496684	SPON1	Q9HCB6	807 aa		11.3	□□□□□ -0.6
CCT3-215	ENST00000496684	TOPAZ1	Q8N9V7	1692 aa		11.3	□□□□□ -0.6
CCT3-215	ENST00000496684	GPRASP1	Q5JY77	1395 aa		11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	DHX57	Q6P158	1386 aa	Known RBP	11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	LRRC37A3	O60309	1634 aa		11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	WNK3	Q9BYP7	1800 aa		11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	ATP7B	P35670	1465 aa		11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	GOLGB1	Q14789	3259 aa	Known RBP	11.29	□□□□□ -0.6
CCT3-215	ENST00000496684	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.28	□□□□□ -0.6
CCT3-215	ENST00000496684	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.28	□□□□□ -0.6
CCT3-215	ENST00000496684	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.28	□□□□□ -0.6
CCT3-215	ENST00000496684	STRN4	Q9NRL3	753 aa		11.28	□□□□□ -0.6
CCT3-215	ENST00000496684	NBPF8	Q3BBV2	869 aa		11.27	□□□□□ -0.61
CCT3-215	ENST00000496684	NBPF14	Q5TI25	921 aa		11.27	□□□□□ -0.61
CCT3-215	ENST00000496684	USP35	Q9P2H5	1018 aa		11.27	□□□□□ -0.61
CCT3-215	ENST00000496684	BARGIN	Q6ZT62	677 aa		11.26	□□□□□ -0.61
CCT3-215	ENST00000496684	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.26	□□□□□ -0.61
CCT3-215	ENST00000496684	PAK3	O75914	559 aa	Predicted RBP	11.25	□□□□□ -0.61
CCT3-215	ENST00000496684	ZC3H6	P61129	1189 aa	Known RBP	11.25	□□□□□ -0.61
CCT3-215	ENST00000496684	LARP1	Q6PKG0	1096 aa	Known RBP	11.25	□□□□□ -0.61
CCT3-215	ENST00000496684	POGK	Q9P215	609 aa		11.25	□□□□□ -0.61
CCT3-215	ENST00000496684	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.25	□□□□□ -0.61
CCT3-215	ENST00000496684	AKAP12	Q02952	1782 aa		11.24	□□□□□ -0.61
CCT3-215	ENST00000496684	PDE3B	Q13370	1112 aa		11.24	□□□□□ -0.61
CCT3-215	ENST00000496684	NUTM2G	Q5VZR2	741 aa		11.24	□□□□□ -0.61
CCT3-215	ENST00000496684	PTF1A	Q7RTS3	328 aa		11.24	□□□□□ -0.61
CCT3-215	ENST00000496684	EIF3A	Q14152	1382 aa	Known RBP	11.24	□□□□□ -0.61
CCT3-215	ENST00000496684	WASL	O00401	505 aa	Predicted RBP	11.23	□□□□□ -0.61
CCT3-215	ENST00000496684	PTGER2	P43116	358 aa		11.23	□□□□□ -0.61
CCT3-215	ENST00000496684	NGDN	Q8NEJ9	315 aa	Known RBP	11.23	□□□□□ -0.61
CCT3-215	ENST00000496684	MPHOSPH9	Q99550	1183 aa		11.23	□□□□□ -0.61
CCT3-215	ENST00000496684	COL5A2	P05997	1499 aa	Predicted RBP	11.23	□□□□□ -0.61
CCT3-215	ENST00000496684	SENP3-EIF4A1	A0A087X0R7	540 aa		11.22	□□□□□ -0.61
CCT3-215	ENST00000496684	OVOS2	A0A0G2JMS6	1433 aa		11.22	□□□□□ -0.61

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