RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 ANAPC4Q9UJX5 808 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 GOLGA6L9A6NEM1 432 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 HSPA4P34932 840 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 HDGFL2Q7Z4V5 671 aaPredicted RBP6.12□□□□□ -1.43
NF1-216ENST00000495910 DZIP1LQ8IYY4 767 aaKnown RBP6.12□□□□□ -1.43
NF1-216ENST00000495910 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
NF1-216ENST00000495910 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 TRERF1Q96PN7 1200 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 STIM1Q13586 685 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 PRDM10Q9NQV6 1147 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 U2AF1L5P0DN76 240 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 U2AF1Q01081 240 aaKnown RBP eCLIP6.11□□□□□ -1.432e-6■□□□□ 9.2
NF1-216ENST00000495910 SMC6Q96SB8 1091 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 SCRIBQ14160 1630 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 ARID4AP29374 1257 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 CBX1P83916 185 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 SPC24Q8NBT2 197 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 SRPK2P78362 688 aaKnown RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 SERPINA10Q9UK55 444 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 HMGB1P1B2RPK0 211 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 KIF2AO00139 706 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 PPM1FP49593 454 aaPredicted RBP6.11□□□□□ -1.43
NF1-216ENST00000495910 FOSBP53539 338 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 RAB3IL1Q8TBN0 382 aa6.11□□□□□ -1.43
NF1-216ENST00000495910 CCDC158Q5M9N0 1113 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 MPHOSPH10O00566 681 aaKnown RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 TACC1O75410 805 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.435e-6■■■■□ 24.4
NF1-216ENST00000495910 TPD52P55327 224 aaPredicted RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 FLIIQ13045 1269 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 HOMER2Q9NSB8 354 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 PPP1R12BO60237 982 aaPredicted RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 STMN1P16949 149 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 FILIP1Q7Z7B0 1213 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 BCL2L13Q9BXK5 485 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 TANGO6Q9C0B7 1094 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 KIF5BP33176 963 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 HOOK3Q86VS8 718 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 ZNF396Q96N95 335 aaPredicted RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 POTEJP0CG39 1038 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 FAM177A1Q8N128 213 aaPredicted RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 PPFIBP2Q8ND30 876 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 PPP1R9BQ96SB3 815 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 HDGFP51858 240 aaKnown RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 SMARCC1Q92922 1105 aaPredicted RBP6.1□□□□□ -1.43
NF1-216ENST00000495910 FMNL2Q96PY5 1086 aa6.1□□□□□ -1.43
NF1-216ENST00000495910 MAP3K7CLP57077 242 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 PDE3BQ13370 1112 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 GSTTP1A0A1W2PQM5 241 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 POTEB2H3BUK9 544 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 TRIM21P19474 475 aaKnown RBP6.09□□□□□ -1.43
NF1-216ENST00000495910 CTR9Q6PD62 1173 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 CLUAP1Q96AJ1 413 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.43
NF1-216ENST00000495910 PABPN1LA6NDY0 278 aaKnown RBP6.09□□□□□ -1.43
NF1-216ENST00000495910 MSL1Q68DK7 614 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 RABGAP1Q9Y3P9 1069 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 TSNARE1Q96NA8 513 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 DNAI2Q9GZS0 605 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 TTC36A6NLP5 189 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 TRAK2O60296 914 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 CCDC192P0DO97 292 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 GBP7Q8N8V2 638 aaPredicted RBP6.09□□□□□ -1.43
NF1-216ENST00000495910 RSRC1Q96IZ7 334 aaKnown RBP6.09□□□□□ -1.43
NF1-216ENST00000495910 GOPCQ9HD26 462 aa6.09□□□□□ -1.43
NF1-216ENST00000495910 NFKBIBQ15653 356 aa6.09□□□□□ -1.44
NF1-216ENST00000495910 IMMTQ16891 758 aaKnown RBP6.09□□□□□ -1.44
NF1-216ENST00000495910 INTS3Q68E01 1043 aaKnown RBP6.09□□□□□ -1.44
NF1-216ENST00000495910 RALYLQ86SE5 291 aaKnown RBP6.09□□□□□ -1.44
NF1-216ENST00000495910 IFIT2P09913 472 aaKnown RBP6.08□□□□□ -1.44
NF1-216ENST00000495910 HOMEZQ8IX15 550 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 SETDB1Q15047 1291 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
NF1-216ENST00000495910 NSRP1Q9H0G5 558 aaKnown RBP6.08□□□□□ -1.44
NF1-216ENST00000495910 ZBTB17Q13105 803 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 C10orf67Q8IYJ2 551 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 IVLP07476 585 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 MXRA7P84157 204 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 ARHGAP29Q52LW3 1261 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 TAOK3Q9H2K8 898 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
NF1-216ENST00000495910 KIF5CO60282 957 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 PSMA5P28066 241 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 PDIA4P13667 645 aaKnown RBP6.08□□□□□ -1.44
NF1-216ENST00000495910 UBE2Q2Q8WVN8 375 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 FAM114A2Q9NRY5 505 aa6.08□□□□□ -1.44
NF1-216ENST00000495910 FSD2A1L4K1 749 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 APBB1IPQ7Z5R6 666 aaPredicted RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 JMYQ8N9B5 988 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 BRPF3Q9ULD4 1205 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 LIG1P18858 919 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 CASQ1P31415 396 aa6.07□□□□□ -1.44
NF1-216ENST00000495910 CWC25Q9NXE8 425 aaPredicted RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 MAP4K4O95819 1239 aaPredicted RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 ZNF397Q8NF99 534 aaPredicted RBP6.07□□□□□ -1.44
NF1-216ENST00000495910 VPS37DQ86XT2 251 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms