RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-208ENST00000494334 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
COL1A1-208ENST00000494334 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
COL1A1-208ENST00000494334 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-208ENST00000494334 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
COL1A1-208ENST00000494334 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
COL1A1-208ENST00000494334 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
COL1A1-208ENST00000494334 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
COL1A1-208ENST00000494334 NUTM2GQ5VZR2 741 aa18.88■□□□□ 0.61
COL1A1-208ENST00000494334 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-208ENST00000494334 TERF2IPQ9NYB0 399 aa18.88■□□□□ 0.61
COL1A1-208ENST00000494334 RGS17Q9UGC6 210 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-208ENST00000494334 TTC21BQ7Z4L5 1316 aa18.88■□□□□ 0.61
COL1A1-208ENST00000494334 KTN1Q86UP2 1357 aaKnown RBP18.88■□□□□ 0.61
COL1A1-208ENST00000494334 ALS2Q96Q42 1657 aa18.88■□□□□ 0.61
COL1A1-208ENST00000494334 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
COL1A1-208ENST00000494334 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-208ENST00000494334 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-208ENST00000494334 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
COL1A1-208ENST00000494334 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
COL1A1-208ENST00000494334 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
COL1A1-208ENST00000494334 AKAP12Q02952 1782 aa18.83■□□□□ 0.61
COL1A1-208ENST00000494334 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
COL1A1-208ENST00000494334 NLRP6P59044 892 aa18.83■□□□□ 0.6
COL1A1-208ENST00000494334 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
COL1A1-208ENST00000494334 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
COL1A1-208ENST00000494334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL1A1-208ENST00000494334 AFF2P51816 1311 aa18.81■□□□□ 0.6
COL1A1-208ENST00000494334 USP19O94966 1318 aa18.8■□□□□ 0.6
COL1A1-208ENST00000494334 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-208ENST00000494334 EDC4Q6P2E9 1401 aaKnown RBP18.8■□□□□ 0.6
COL1A1-208ENST00000494334 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-208ENST00000494334 NME9Q86XW9 330 aa18.79■□□□□ 0.6
COL1A1-208ENST00000494334 MON2Q7Z3U7 1717 aa18.79■□□□□ 0.6
COL1A1-208ENST00000494334 NRKQ7Z2Y5 1582 aa18.78■□□□□ 0.6
COL1A1-208ENST00000494334 FAM83GA6ND36 823 aa18.78■□□□□ 0.6
COL1A1-208ENST00000494334 GCP02774 474 aa18.78■□□□□ 0.6
COL1A1-208ENST00000494334 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
COL1A1-208ENST00000494334 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
COL1A1-208ENST00000494334 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-208ENST00000494334 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
COL1A1-208ENST00000494334 ABCA3Q99758 1704 aa18.77■□□□□ 0.59
COL1A1-208ENST00000494334 KIF7Q2M1P5 1343 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 USP21Q9UK80 565 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 CRYBG1Q9Y4K1 1723 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
COL1A1-208ENST00000494334 MYOM1P52179 1685 aa18.75■□□□□ 0.59
COL1A1-208ENST00000494334 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
COL1A1-208ENST00000494334 PRDM11Q9NQV5 511 aa18.74■□□□□ 0.59
COL1A1-208ENST00000494334 SLIT2O94813 1529 aa18.74■□□□□ 0.59
COL1A1-208ENST00000494334 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
COL1A1-208ENST00000494334 ILDR2Q71H61 639 aa18.73■□□□□ 0.59
COL1A1-208ENST00000494334 QTRT2Q9H974 415 aaKnown RBP18.73■□□□□ 0.59
COL1A1-208ENST00000494334 MARF1Q9Y4F3 1742 aaKnown RBP18.72■□□□□ 0.59
COL1A1-208ENST00000494334 PHRF1Q9P1Y6 1649 aaKnown RBP18.72■□□□□ 0.59
COL1A1-208ENST00000494334 FYB1O15117 783 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 UNC5CLQ8IV45 518 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 KCNH5Q8NCM2 988 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 PANK3Q9H999 370 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 SLIT3O75094 1523 aa18.72■□□□□ 0.59
COL1A1-208ENST00000494334 CPDO75976 1380 aa18.71■□□□□ 0.59
COL1A1-208ENST00000494334 BTG4Q9NY30 223 aa18.71■□□□□ 0.59
COL1A1-208ENST00000494334 NSD3Q9BZ95 1437 aa18.71■□□□□ 0.59
COL1A1-208ENST00000494334 WASHC2AQ641Q2 1341 aa18.71■□□□□ 0.59
COL1A1-208ENST00000494334 SOX12O15370 315 aa18.7■□□□□ 0.58
COL1A1-208ENST00000494334 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-208ENST00000494334 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
COL1A1-208ENST00000494334 OVOS2A0A0J9YW53 1432 aa18.69■□□□□ 0.58
COL1A1-208ENST00000494334 OVOS2Q6IE36 1432 aa18.69■□□□□ 0.58
COL1A1-208ENST00000494334 COG3Q96JB2 828 aa18.69■□□□□ 0.58
COL1A1-208ENST00000494334 GGNBP2Q9H3C7 697 aa18.69■□□□□ 0.58
COL1A1-208ENST00000494334 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
COL1A1-208ENST00000494334 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
COL1A1-208ENST00000494334 RXRBP28702 533 aa18.67■□□□□ 0.58
COL1A1-208ENST00000494334 ATRNO75882 1429 aa18.66■□□□□ 0.58
COL1A1-208ENST00000494334 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
COL1A1-208ENST00000494334 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
COL1A1-208ENST00000494334 VPS72Q15906 364 aa18.65■□□□□ 0.58
COL1A1-208ENST00000494334 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
COL1A1-208ENST00000494334 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
COL1A1-208ENST00000494334 NFAT5O94916 1531 aa18.64■□□□□ 0.58
COL1A1-208ENST00000494334 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-208ENST00000494334 AATKQ6ZMQ8 1374 aa18.64■□□□□ 0.57
COL1A1-208ENST00000494334 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
COL1A1-208ENST00000494334 FBLN1P23142 703 aa18.63■□□□□ 0.57
COL1A1-208ENST00000494334 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
COL1A1-208ENST00000494334 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
COL1A1-208ENST00000494334 CAMTA1Q9Y6Y1 1673 aa18.62■□□□□ 0.57
COL1A1-208ENST00000494334 NWD2Q9ULI1 1742 aa18.62■□□□□ 0.57
COL1A1-208ENST00000494334 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-208ENST00000494334 EVA1CP58658 441 aa18.61■□□□□ 0.57
COL1A1-208ENST00000494334 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
COL1A1-208ENST00000494334 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
COL1A1-208ENST00000494334 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.6■□□□□ 0.57
COL1A1-208ENST00000494334 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
COL1A1-208ENST00000494334 NRAPQ86VF7 1730 aa18.59■□□□□ 0.57
COL1A1-208ENST00000494334 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms