RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 HPS1Q92902 700 aa8.15□□□□□ -1.1
VPS36-205ENST00000492650 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
VPS36-205ENST00000492650 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
VPS36-205ENST00000492650 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
VPS36-205ENST00000492650 LILRB3O75022 631 aa8.13□□□□□ -1.11
VPS36-205ENST00000492650 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
VPS36-205ENST00000492650 ZNF511Q8NB15 262 aa8.13□□□□□ -1.11
VPS36-205ENST00000492650 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
VPS36-205ENST00000492650 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
VPS36-205ENST00000492650 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
VPS36-205ENST00000492650 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
VPS36-205ENST00000492650 SIAH2O43255 324 aa8.12□□□□□ -1.11
VPS36-205ENST00000492650 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
VPS36-205ENST00000492650 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
VPS36-205ENST00000492650 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
VPS36-205ENST00000492650 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
VPS36-205ENST00000492650 GMPR2Q9P2T1 348 aaKnown RBP8.11□□□□□ -1.11
VPS36-205ENST00000492650 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
VPS36-205ENST00000492650 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
VPS36-205ENST00000492650 F12P00748 615 aaPredicted RBP8.09□□□□□ -1.11
VPS36-205ENST00000492650 AGERQ15109 404 aa8.09□□□□□ -1.11
VPS36-205ENST00000492650 FAM117AQ9C073 453 aa8.09□□□□□ -1.11
VPS36-205ENST00000492650 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
VPS36-205ENST00000492650 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
VPS36-205ENST00000492650 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
VPS36-205ENST00000492650 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
VPS36-205ENST00000492650 SKIV2LQ15477 1246 aaKnown RBP8.07□□□□□ -1.12
VPS36-205ENST00000492650 FAM174AQ8TBP5 190 aa8.07□□□□□ -1.12
VPS36-205ENST00000492650 FOXJ1Q92949 421 aa8.07□□□□□ -1.12
VPS36-205ENST00000492650 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
VPS36-205ENST00000492650 CAPN5O15484 640 aaPredicted RBP8.05□□□□□ -1.12
VPS36-205ENST00000492650 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
VPS36-205ENST00000492650 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
VPS36-205ENST00000492650 CTDSPL2Q05D32 466 aa8.04□□□□□ -1.12
VPS36-205ENST00000492650 SH3D19Q5HYK7 790 aa8.04□□□□□ -1.12
VPS36-205ENST00000492650 BPHLQ86WA6 291 aaPredicted RBP8.04□□□□□ -1.12
VPS36-205ENST00000492650 PROCA1Q8NCQ7 364 aaPredicted RBP8.04□□□□□ -1.12
VPS36-205ENST00000492650 MPNDQ8N594 471 aa8.03□□□□□ -1.12
VPS36-205ENST00000492650 SNRPBP14678 240 aaKnown RBP8.02□□□□□ -1.13
VPS36-205ENST00000492650 NNTQ13423 1086 aa8.02□□□□□ -1.13
VPS36-205ENST00000492650 NBPF14Q5TI25 921 aa8.02□□□□□ -1.13
VPS36-205ENST00000492650 BMP1P13497 986 aa8.01□□□□□ -1.13
VPS36-205ENST00000492650 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
VPS36-205ENST00000492650 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
VPS36-205ENST00000492650 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
VPS36-205ENST00000492650 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
VPS36-205ENST00000492650 ADH1CP00326 375 aa8□□□□□ -1.13
VPS36-205ENST00000492650 NEUROD2Q15784 382 aa8□□□□□ -1.13
VPS36-205ENST00000492650 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
VPS36-205ENST00000492650 CDK15Q96Q40 435 aa8□□□□□ -1.13
VPS36-205ENST00000492650 GNL3Q9BVP2 549 aaKnown RBP eCLIP8□□□□□ -1.13
VPS36-205ENST00000492650 AP1G2O75843 785 aa7.99□□□□□ -1.13
VPS36-205ENST00000492650 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
VPS36-205ENST00000492650 FBXO31Q5XUX0 539 aaPredicted RBP7.99□□□□□ -1.13
VPS36-205ENST00000492650 TREML4Q6UXN2 200 aa7.99□□□□□ -1.13
VPS36-205ENST00000492650 PPP2R2DQ66LE6 453 aa7.98□□□□□ -1.13
VPS36-205ENST00000492650 TRIM46Q7Z4K8 759 aa7.98□□□□□ -1.13
VPS36-205ENST00000492650 CARD14Q9BXL6 1004 aa7.98□□□□□ -1.13
VPS36-205ENST00000492650 NR5A1Q13285 461 aa7.97□□□□□ -1.13
VPS36-205ENST00000492650 TIMP2P16035 220 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 GRM5P41594 1212 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 NR6A1Q15406 480 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 SH3BP5LQ7L8J4 393 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 IL27Q8NEV9 243 aa7.96□□□□□ -1.14
VPS36-205ENST00000492650 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.145e-7■■■□□ 17.4
VPS36-205ENST00000492650 WFS1O76024 890 aa7.95□□□□□ -1.14
VPS36-205ENST00000492650 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
VPS36-205ENST00000492650 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
VPS36-205ENST00000492650 PCMTD1Q96MG8 357 aaPredicted RBP7.95□□□□□ -1.14
VPS36-205ENST00000492650 FKBPLQ9UIM3 349 aa7.95□□□□□ -1.14
VPS36-205ENST00000492650 NR3C2P08235 984 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 SCARF1Q14162 830 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 ARHGAP9Q9BRR9 750 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 C1QTNF2Q9BXJ5 285 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
VPS36-205ENST00000492650 FSHRP23945 695 aa7.93□□□□□ -1.14
VPS36-205ENST00000492650 MRPL14Q6P1L8 145 aaKnown RBP7.93□□□□□ -1.14
VPS36-205ENST00000492650 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
VPS36-205ENST00000492650 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
VPS36-205ENST00000492650 ITPKCQ96DU7 683 aa7.93□□□□□ -1.14
VPS36-205ENST00000492650 PURBQ96QR8 312 aaKnown RBP7.93□□□□□ -1.14
VPS36-205ENST00000492650 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
VPS36-205ENST00000492650 USP17L8P0C7I0 530 aa7.92□□□□□ -1.14
VPS36-205ENST00000492650 RFC5P40937 340 aa7.92□□□□□ -1.14
VPS36-205ENST00000492650 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
VPS36-205ENST00000492650 TRMT44Q8IYL2 757 aaKnown RBP7.92□□□□□ -1.14
VPS36-205ENST00000492650 MAP4K5Q9Y4K4 846 aa7.92□□□□□ -1.14
VPS36-205ENST00000492650 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
VPS36-205ENST00000492650 NFX1Q12986 1120 aaKnown RBP7.91□□□□□ -1.14
VPS36-205ENST00000492650 PNMA1Q8ND90 353 aa7.91□□□□□ -1.14
VPS36-205ENST00000492650 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
VPS36-205ENST00000492650 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
VPS36-205ENST00000492650 PTK2Q05397 1052 aa7.9□□□□□ -1.14
VPS36-205ENST00000492650 TPRNQ4KMQ1 711 aa7.9□□□□□ -1.14
VPS36-205ENST00000492650 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
VPS36-205ENST00000492650 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
VPS36-205ENST00000492650 EPS8L1Q8TE68 723 aa7.9□□□□□ -1.14
VPS36-205ENST00000492650 UPP2O95045 317 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms