RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 CSPP1Q1MSJ5 1256 aa7.01□□□□□ -1.29
PDZD8-204ENST00000489491 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
PDZD8-204ENST00000489491 PRPF38BQ5VTL8 546 aaKnown RBP7.01□□□□□ -1.29
PDZD8-204ENST00000489491 TREML4Q6UXN2 200 aa7.01□□□□□ -1.29
PDZD8-204ENST00000489491 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
PDZD8-204ENST00000489491 TLL2Q9Y6L7 1015 aa7.01□□□□□ -1.29
PDZD8-204ENST00000489491 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
PDZD8-204ENST00000489491 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
PDZD8-204ENST00000489491 TRIM46Q7Z4K8 759 aa7□□□□□ -1.29
PDZD8-204ENST00000489491 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
PDZD8-204ENST00000489491 FOXJ1Q92949 421 aa7□□□□□ -1.29
PDZD8-204ENST00000489491 ZBTB3Q9H5J0 574 aa7□□□□□ -1.29
PDZD8-204ENST00000489491 C11orf95C9JLR9 678 aaPredicted RBP6.99□□□□□ -1.29
PDZD8-204ENST00000489491 DIXDC1Q155Q3 683 aa6.98□□□□□ -1.29
PDZD8-204ENST00000489491 TRIM47Q96LD4 638 aa6.98□□□□□ -1.29
PDZD8-204ENST00000489491 KLF16Q9BXK1 252 aaPredicted RBP6.98□□□□□ -1.29
PDZD8-204ENST00000489491 MPNDQ8N594 471 aa6.97□□□□□ -1.29
PDZD8-204ENST00000489491 GPBP1L1Q9HC44 474 aaPredicted RBP6.97□□□□□ -1.29
PDZD8-204ENST00000489491 BMP1P13497 986 aa6.96□□□□□ -1.3
PDZD8-204ENST00000489491 PLEKHG3A1L390 1219 aa6.95□□□□□ -1.3
PDZD8-204ENST00000489491 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
PDZD8-204ENST00000489491 CTHP32929 405 aa6.95□□□□□ -1.3
PDZD8-204ENST00000489491 FAM117AQ9C073 453 aa6.95□□□□□ -1.3
PDZD8-204ENST00000489491 POLR3EQ9NVU0 708 aa6.95□□□□□ -1.3
PDZD8-204ENST00000489491 GRM5P41594 1212 aa6.94□□□□□ -1.3
PDZD8-204ENST00000489491 CLK2P49760 499 aaKnown RBP6.94□□□□□ -1.3
PDZD8-204ENST00000489491 PROCA1Q8NCQ7 364 aaPredicted RBP6.94□□□□□ -1.3
PDZD8-204ENST00000489491 CDK15Q96Q40 435 aa6.94□□□□□ -1.3
PDZD8-204ENST00000489491 NR3C2P08235 984 aa6.93□□□□□ -1.3
PDZD8-204ENST00000489491 TIMP2P16035 220 aa6.93□□□□□ -1.3
PDZD8-204ENST00000489491 CTDSPL2Q05D32 466 aa6.93□□□□□ -1.3
PDZD8-204ENST00000489491 SH3RF1Q7Z6J0 888 aa6.93□□□□□ -1.3
PDZD8-204ENST00000489491 CAPN5O15484 640 aaPredicted RBP6.92□□□□□ -1.3
PDZD8-204ENST00000489491 NNTQ13423 1086 aa6.92□□□□□ -1.3
PDZD8-204ENST00000489491 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDZD8-204ENST00000489491 C1QTNF2Q9BXJ5 285 aa6.92□□□□□ -1.3
PDZD8-204ENST00000489491 KDM4CQ9H3R0 1056 aa6.92□□□□□ -1.3
PDZD8-204ENST00000489491 WFS1O76024 890 aa6.91□□□□□ -1.3
PDZD8-204ENST00000489491 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
PDZD8-204ENST00000489491 WASF2Q9Y6W5 498 aa6.91□□□□□ -1.3
PDZD8-204ENST00000489491 NUTM2BA6NNL0 878 aaPredicted RBP6.9□□□□□ -1.3
PDZD8-204ENST00000489491 NUTM2EB1AL46 878 aaPredicted RBP6.9□□□□□ -1.3
PDZD8-204ENST00000489491 TERTO14746 1132 aaKnown RBP6.9□□□□□ -1.3
PDZD8-204ENST00000489491 NUTM2DQ5VT03 806 aaPredicted RBP6.9□□□□□ -1.3
PDZD8-204ENST00000489491 NUTM2AQ8IVF1 878 aaPredicted RBP6.9□□□□□ -1.3
PDZD8-204ENST00000489491 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.3
PDZD8-204ENST00000489491 TSC1Q92574 1164 aa6.9□□□□□ -1.3
PDZD8-204ENST00000489491 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
PDZD8-204ENST00000489491 ADH1CP00326 375 aa6.89□□□□□ -1.31
PDZD8-204ENST00000489491 ZFP42Q96MM3 310 aa6.89□□□□□ -1.31
PDZD8-204ENST00000489491 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
PDZD8-204ENST00000489491 SENP2Q9HC62 589 aa6.89□□□□□ -1.31
PDZD8-204ENST00000489491 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
PDZD8-204ENST00000489491 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
PDZD8-204ENST00000489491 PPP2R2DQ66LE6 453 aa6.88□□□□□ -1.31
PDZD8-204ENST00000489491 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
PDZD8-204ENST00000489491 ITPKCQ96DU7 683 aa6.88□□□□□ -1.31
PDZD8-204ENST00000489491 WIPF1O43516 503 aa6.87□□□□□ -1.31
PDZD8-204ENST00000489491 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
PDZD8-204ENST00000489491 SH3D19Q5HYK7 790 aa6.87□□□□□ -1.31
PDZD8-204ENST00000489491 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
PDZD8-204ENST00000489491 KIFC2Q96AC6 838 aa6.87□□□□□ -1.31
PDZD8-204ENST00000489491 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
PDZD8-204ENST00000489491 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
PDZD8-204ENST00000489491 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
PDZD8-204ENST00000489491 ARID5BQ14865 1188 aa6.85□□□□□ -1.31
PDZD8-204ENST00000489491 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
PDZD8-204ENST00000489491 ZIC2O95409 532 aaPredicted RBP6.84□□□□□ -1.31
PDZD8-204ENST00000489491 VEGFBP49765 207 aa6.84□□□□□ -1.31
PDZD8-204ENST00000489491 NR6A1Q15406 480 aa6.84□□□□□ -1.31
PDZD8-204ENST00000489491 ERFEQ4G0M1 354 aa6.84□□□□□ -1.31
PDZD8-204ENST00000489491 BPHLQ86WA6 291 aaPredicted RBP6.84□□□□□ -1.31
PDZD8-204ENST00000489491 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
PDZD8-204ENST00000489491 HMX1Q9NP08 348 aaPredicted RBP6.84□□□□□ -1.31
PDZD8-204ENST00000489491 ERBB4Q15303 1308 aa6.83□□□□□ -1.32
PDZD8-204ENST00000489491 NR5A1Q13285 461 aa6.83□□□□□ -1.32
PDZD8-204ENST00000489491 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
PDZD8-204ENST00000489491 BCANQ96GW7 911 aa6.83□□□□□ -1.32
PDZD8-204ENST00000489491 NXF1Q9UBU9 619 aaKnown RBP6.83□□□□□ -1.32
PDZD8-204ENST00000489491 MAP4K5Q9Y4K4 846 aa6.82□□□□□ -1.32
PDZD8-204ENST00000489491 AGERQ15109 404 aa6.81□□□□□ -1.32
PDZD8-204ENST00000489491 MAGEB6P1A0A0J9YX57 407 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 H3BM21 787 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 GMPRP36959 345 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 PDXDC2PQ6P474 469 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 MEIOBQ8N635 442 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 ARMC2Q8NEN0 867 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 CARD14Q9BXL6 1004 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
PDZD8-204ENST00000489491 SLC24A1O60721 1099 aa6.79□□□□□ -1.32
PDZD8-204ENST00000489491 FSHRP23945 695 aa6.79□□□□□ -1.32
PDZD8-204ENST00000489491 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
PDZD8-204ENST00000489491 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
PDZD8-204ENST00000489491 CBLBQ13191 982 aa6.78□□□□□ -1.32
PDZD8-204ENST00000489491 VASH1Q7L8A9 365 aaPredicted RBP6.78□□□□□ -1.32
PDZD8-204ENST00000489491 GPKOWQ92917 476 aaPredicted RBP eCLIP6.78□□□□□ -1.32
PDZD8-204ENST00000489491 SOS2Q07890 1332 aaPredicted RBP6.77□□□□□ -1.32
PDZD8-204ENST00000489491 AP1G2O75843 785 aa6.77□□□□□ -1.33
PDZD8-204ENST00000489491 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms