RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
FDPS-213ENST00000489003 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
FDPS-213ENST00000489003 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
FDPS-213ENST00000489003 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
FDPS-213ENST00000489003 TTC21BQ7Z4L5 1316 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 ALS2Q96Q42 1657 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 COL22A1Q8NFW1 1626 aaPredicted RBP21.09■□□□□ 0.97
FDPS-213ENST00000489003 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 CABLES1Q8TDN4 633 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 ARHGEF10O15013 1369 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
FDPS-213ENST00000489003 NUTM2GQ5VZR2 741 aa21.08■□□□□ 0.97
FDPS-213ENST00000489003 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
FDPS-213ENST00000489003 LRP6O75581 1613 aa21.07■□□□□ 0.96
FDPS-213ENST00000489003 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
FDPS-213ENST00000489003 ADAMTS2O95450 1211 aa21.05■□□□□ 0.96
FDPS-213ENST00000489003 A0A1W2PP64 1363 aa21.05■□□□□ 0.96
FDPS-213ENST00000489003 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
FDPS-213ENST00000489003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
FDPS-213ENST00000489003 MEX3CQ5U5Q3 659 aaKnown RBP21.03■□□□□ 0.96
FDPS-213ENST00000489003 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
FDPS-213ENST00000489003 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
FDPS-213ENST00000489003 TTC21AQ8NDW8 1320 aa21.03■□□□□ 0.96
FDPS-213ENST00000489003 ANKRD36BQ8N2N9 1353 aa21.02■□□□□ 0.96
FDPS-213ENST00000489003 NLRP6P59044 892 aa21.02■□□□□ 0.96
FDPS-213ENST00000489003 CARD14Q9BXL6 1004 aa21.01■□□□□ 0.95
FDPS-213ENST00000489003 MYOM1P52179 1685 aa21■□□□□ 0.95
FDPS-213ENST00000489003 HAP1P54257 671 aaPredicted RBP21■□□□□ 0.95
FDPS-213ENST00000489003 ZRANB1Q9UGI0 708 aa21■□□□□ 0.95
FDPS-213ENST00000489003 EDC4Q6P2E9 1401 aaKnown RBP20.99■□□□□ 0.95
FDPS-213ENST00000489003 NME9Q86XW9 330 aa20.99■□□□□ 0.95
FDPS-213ENST00000489003 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
FDPS-213ENST00000489003 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
FDPS-213ENST00000489003 NGLY1Q96IV0 654 aa20.98■□□□□ 0.95
FDPS-213ENST00000489003 C8orf37Q96NL8 207 aa20.98■□□□□ 0.95
FDPS-213ENST00000489003 PANK3Q9H999 370 aa20.98■□□□□ 0.95
FDPS-213ENST00000489003 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
FDPS-213ENST00000489003 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
FDPS-213ENST00000489003 WASHC2AQ641Q2 1341 aa20.97■□□□□ 0.95
FDPS-213ENST00000489003 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
FDPS-213ENST00000489003 CRYBG1Q9Y4K1 1723 aa20.96■□□□□ 0.95
FDPS-213ENST00000489003 GCP02774 474 aa20.96■□□□□ 0.95
FDPS-213ENST00000489003 USP19O94966 1318 aa20.96■□□□□ 0.95
FDPS-213ENST00000489003 USP31Q70CQ4 1352 aa20.96■□□□□ 0.95
FDPS-213ENST00000489003 CCDC7Q96M83 1385 aa20.96■□□□□ 0.95
FDPS-213ENST00000489003 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
FDPS-213ENST00000489003 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
FDPS-213ENST00000489003 FYB1O15117 783 aa20.94■□□□□ 0.94
FDPS-213ENST00000489003 FNBP4Q8N3X1 1017 aaPredicted RBP20.94■□□□□ 0.94
FDPS-213ENST00000489003 ZC3H6P61129 1189 aaKnown RBP20.93■□□□□ 0.94
FDPS-213ENST00000489003 AFF2P51816 1311 aa20.93■□□□□ 0.94
FDPS-213ENST00000489003 PHRF1Q9P1Y6 1649 aaKnown RBP20.92■□□□□ 0.94
FDPS-213ENST00000489003 NSD3Q9BZ95 1437 aa20.9■□□□□ 0.94
FDPS-213ENST00000489003 KIAA0232Q92628 1395 aa20.89■□□□□ 0.93
FDPS-213ENST00000489003 ZNF772Q68DY9 489 aaPredicted RBP20.89■□□□□ 0.93
FDPS-213ENST00000489003 POTEAQ6S8J7 498 aa20.89■□□□□ 0.93
FDPS-213ENST00000489003 KCNH5Q8NCM2 988 aa20.89■□□□□ 0.93
FDPS-213ENST00000489003 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
FDPS-213ENST00000489003 USP21Q9UK80 565 aa20.89■□□□□ 0.93
FDPS-213ENST00000489003 SLIT3O75094 1523 aa20.88■□□□□ 0.93
FDPS-213ENST00000489003 SOX12O15370 315 aa20.88■□□□□ 0.93
FDPS-213ENST00000489003 CHRNA2Q15822 529 aa20.88■□□□□ 0.93
FDPS-213ENST00000489003 COG3Q96JB2 828 aa20.88■□□□□ 0.93
FDPS-213ENST00000489003 PRDM11Q9NQV5 511 aa20.88■□□□□ 0.93
FDPS-213ENST00000489003 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
FDPS-213ENST00000489003 QTRT2Q9H974 415 aaKnown RBP20.86■□□□□ 0.93
FDPS-213ENST00000489003 SLIT2O94813 1529 aa20.86■□□□□ 0.93
FDPS-213ENST00000489003 BCL9LQ86UU0 1499 aa20.86■□□□□ 0.93
FDPS-213ENST00000489003 CPDO75976 1380 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
FDPS-213ENST00000489003 ARHGEF25Q86VW2 580 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 UNC5CLQ8IV45 518 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 BTG4Q9NY30 223 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 OVOS2A0A0J9YW53 1432 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 OVOS2Q6IE36 1432 aa20.85■□□□□ 0.93
FDPS-213ENST00000489003 FBLN1P23142 703 aa20.84■□□□□ 0.93
FDPS-213ENST00000489003 CGNL1Q0VF96 1302 aa20.83■□□□□ 0.93
FDPS-213ENST00000489003 COL14A1Q05707 1796 aaKnown RBP20.83■□□□□ 0.93
FDPS-213ENST00000489003 ZBTB7CA1YPR0 619 aa20.83■□□□□ 0.93
FDPS-213ENST00000489003 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.93
FDPS-213ENST00000489003 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.92
FDPS-213ENST00000489003 TRPC5Q9UL62 973 aaPredicted RBP20.81■□□□□ 0.92
FDPS-213ENST00000489003 NFAT5O94916 1531 aa20.81■□□□□ 0.92
FDPS-213ENST00000489003 PLCH1Q4KWH8 1693 aa20.8■□□□□ 0.92
FDPS-213ENST00000489003 AXIN2Q9Y2T1 843 aa20.8■□□□□ 0.92
FDPS-213ENST00000489003 NWD2Q9ULI1 1742 aa20.8■□□□□ 0.92
FDPS-213ENST00000489003 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
FDPS-213ENST00000489003 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
FDPS-213ENST00000489003 COL18A1P39060 1754 aa20.79■□□□□ 0.92
FDPS-213ENST00000489003 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
FDPS-213ENST00000489003 ATRNO75882 1429 aa20.78■□□□□ 0.92
FDPS-213ENST00000489003 RXRBP28702 533 aa20.77■□□□□ 0.92
FDPS-213ENST00000489003 EVA1CP58658 441 aa20.77■□□□□ 0.92
FDPS-213ENST00000489003 RBM6P78332 1123 aaKnown RBP20.77■□□□□ 0.92
FDPS-213ENST00000489003 VPS72Q15906 364 aa20.77■□□□□ 0.92
FDPS-213ENST00000489003 ILDR2Q71H61 639 aa20.77■□□□□ 0.92
FDPS-213ENST00000489003 GJD4Q96KN9 370 aaPredicted RBP20.76■□□□□ 0.91
FDPS-213ENST00000489003 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
FDPS-213ENST00000489003 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
FDPS-213ENST00000489003 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1525.2 ms