RNA–Protein interactions for RNA: ENST00000486940.2

COG3-204, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 2

Gene COG3, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-204ENST00000486940 TSC1Q92574 1164 aa9.34□□□□□ -0.91
COG3-204ENST00000486940 FAM117AQ9C073 453 aa9.34□□□□□ -0.91
COG3-204ENST00000486940 SKOR1P84550 965 aa9.33□□□□□ -0.92
COG3-204ENST00000486940 MYT1Q01538 1121 aa9.33□□□□□ -0.92
COG3-204ENST00000486940 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
COG3-204ENST00000486940 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
COG3-204ENST00000486940 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
COG3-204ENST00000486940 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
COG3-204ENST00000486940 AVPP01185 164 aa9.3□□□□□ -0.92
COG3-204ENST00000486940 SH3BP2P78314 561 aa9.3□□□□□ -0.92
COG3-204ENST00000486940 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
COG3-204ENST00000486940 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
COG3-204ENST00000486940 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
COG3-204ENST00000486940 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
COG3-204ENST00000486940 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
COG3-204ENST00000486940 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
COG3-204ENST00000486940 ZNF511Q8NB15 262 aa9.29□□□□□ -0.92
COG3-204ENST00000486940 BAP1Q92560 729 aa9.29□□□□□ -0.92
COG3-204ENST00000486940 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
COG3-204ENST00000486940 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
COG3-204ENST00000486940 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
COG3-204ENST00000486940 SMPD1P17405 629 aa9.27□□□□□ -0.93
COG3-204ENST00000486940 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
COG3-204ENST00000486940 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
COG3-204ENST00000486940 AXIN1O15169 862 aa9.26□□□□□ -0.93
COG3-204ENST00000486940 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
COG3-204ENST00000486940 ARMC2Q8NEN0 867 aa9.26□□□□□ -0.93
COG3-204ENST00000486940 AAASQ9NRG9 546 aa9.26□□□□□ -0.93
COG3-204ENST00000486940 J3QL48 77 aa9.25□□□□□ -0.93
COG3-204ENST00000486940 ALDH1A1P00352 501 aa9.25□□□□□ -0.93
COG3-204ENST00000486940 ZNF787Q6DD87 383 aa9.25□□□□□ -0.93
COG3-204ENST00000486940 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.25□□□□□ -0.93
COG3-204ENST00000486940 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
COG3-204ENST00000486940 SIAH2O43255 324 aa9.24□□□□□ -0.93
COG3-204ENST00000486940 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
COG3-204ENST00000486940 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
COG3-204ENST00000486940 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
COG3-204ENST00000486940 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
COG3-204ENST00000486940 NBPF14Q5TI25 921 aa9.23□□□□□ -0.93
COG3-204ENST00000486940 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
COG3-204ENST00000486940 AGERQ15109 404 aa9.22□□□□□ -0.93
COG3-204ENST00000486940 BPHLQ86WA6 291 aaPredicted RBP9.22□□□□□ -0.93
COG3-204ENST00000486940 FAM174AQ8TBP5 190 aa9.22□□□□□ -0.93
COG3-204ENST00000486940 PCMTD1Q96MG8 357 aaPredicted RBP9.22□□□□□ -0.93
COG3-204ENST00000486940 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
COG3-204ENST00000486940 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.94
COG3-204ENST00000486940 MPNDQ8N594 471 aa9.21□□□□□ -0.94
COG3-204ENST00000486940 HPS1Q92902 700 aa9.2□□□□□ -0.94
COG3-204ENST00000486940 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.94
COG3-204ENST00000486940 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
COG3-204ENST00000486940 TLL2Q9Y6L7 1015 aa9.19□□□□□ -0.94
COG3-204ENST00000486940 SHROOM4Q9ULL8 1493 aa9.19□□□□□ -0.94
COG3-204ENST00000486940 AP1G2O75843 785 aa9.18□□□□□ -0.94
COG3-204ENST00000486940 FOXJ1Q92949 421 aa9.18□□□□□ -0.94
COG3-204ENST00000486940 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
COG3-204ENST00000486940 LRRN4Q8WUT4 740 aa9.16□□□□□ -0.94
COG3-204ENST00000486940 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
COG3-204ENST00000486940 RFC5P40937 340 aa9.15□□□□□ -0.94
COG3-204ENST00000486940 ADH1CP00326 375 aa9.14□□□□□ -0.95
COG3-204ENST00000486940 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
COG3-204ENST00000486940 FBXO31Q5XUX0 539 aaPredicted RBP9.14□□□□□ -0.95
COG3-204ENST00000486940 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
COG3-204ENST00000486940 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
COG3-204ENST00000486940 FKBPLQ9UIM3 349 aa9.14□□□□□ -0.95
COG3-204ENST00000486940 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 NNTQ13423 1086 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 SH3RF1Q7Z6J0 888 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 ATP13A2Q9NQ11 1180 aa9.13□□□□□ -0.95
COG3-204ENST00000486940 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
COG3-204ENST00000486940 POTECB2RU33 542 aa9.12□□□□□ -0.95
COG3-204ENST00000486940 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
COG3-204ENST00000486940 CAPN5O15484 640 aaPredicted RBP9.12□□□□□ -0.95
COG3-204ENST00000486940 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
COG3-204ENST00000486940 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
COG3-204ENST00000486940 GMPR2Q9P2T1 348 aaKnown RBP9.12□□□□□ -0.95
COG3-204ENST00000486940 NR5A1Q13285 461 aa9.11□□□□□ -0.95
COG3-204ENST00000486940 NR6A1Q15406 480 aa9.11□□□□□ -0.95
COG3-204ENST00000486940 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
COG3-204ENST00000486940 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
COG3-204ENST00000486940 ARHGAP9Q9BRR9 750 aa9.1□□□□□ -0.95
COG3-204ENST00000486940 CARD14Q9BXL6 1004 aa9.1□□□□□ -0.95
COG3-204ENST00000486940 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
COG3-204ENST00000486940 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
COG3-204ENST00000486940 PTK2Q05397 1052 aa9.08□□□□□ -0.96
COG3-204ENST00000486940 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
COG3-204ENST00000486940 ZBTB33Q86T24 672 aa9.08□□□□□ -0.96
COG3-204ENST00000486940 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
COG3-204ENST00000486940 ERFEQ4G0M1 354 aa9.07□□□□□ -0.96
COG3-204ENST00000486940 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
COG3-204ENST00000486940 TRIM47Q96LD4 638 aa9.07□□□□□ -0.96
COG3-204ENST00000486940 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
COG3-204ENST00000486940 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
COG3-204ENST00000486940 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
COG3-204ENST00000486940 TIMP2P16035 220 aa9.05□□□□□ -0.96
COG3-204ENST00000486940 FSHRP23945 695 aa9.05□□□□□ -0.96
COG3-204ENST00000486940 GRM5P41594 1212 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms