RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
PTPN18-212ENST00000483617 UNC5CLQ8IV45 518 aa15.88■□□□□ 0.13
PTPN18-212ENST00000483617 NGDNQ8NEJ9 315 aaKnown RBP15.88■□□□□ 0.13
PTPN18-212ENST00000483617 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
PTPN18-212ENST00000483617 HSPA5P11021 654 aaKnown RBP15.87■□□□□ 0.13
PTPN18-212ENST00000483617 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
PTPN18-212ENST00000483617 GJD4Q96KN9 370 aaPredicted RBP15.87■□□□□ 0.13
PTPN18-212ENST00000483617 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
PTPN18-212ENST00000483617 GLI3P10071 1580 aa15.87■□□□□ 0.13
PTPN18-212ENST00000483617 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
PTPN18-212ENST00000483617 USP47Q96K76 1375 aa15.87■□□□□ 0.13
PTPN18-212ENST00000483617 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
PTPN18-212ENST00000483617 CRYBG1Q9Y4K1 1723 aa15.85■□□□□ 0.13
PTPN18-212ENST00000483617 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
PTPN18-212ENST00000483617 POLR3AO14802 1390 aaPredicted RBP15.84■□□□□ 0.13
PTPN18-212ENST00000483617 NRAPQ86VF7 1730 aa15.83■□□□□ 0.13
PTPN18-212ENST00000483617 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
PTPN18-212ENST00000483617 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
PTPN18-212ENST00000483617 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
PTPN18-212ENST00000483617 VPS72Q15906 364 aa15.82■□□□□ 0.12
PTPN18-212ENST00000483617 FAM83GA6ND36 823 aa15.81■□□□□ 0.12
PTPN18-212ENST00000483617 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
PTPN18-212ENST00000483617 PHRF1Q9P1Y6 1649 aaKnown RBP15.81■□□□□ 0.12
PTPN18-212ENST00000483617 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
PTPN18-212ENST00000483617 ACEP12821 1306 aa15.8■□□□□ 0.12
PTPN18-212ENST00000483617 PLEKHG3A1L390 1219 aa15.8■□□□□ 0.12
PTPN18-212ENST00000483617 SRPK2P78362 688 aaKnown RBP15.8■□□□□ 0.12
PTPN18-212ENST00000483617 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
PTPN18-212ENST00000483617 EP400Q96L91 3159 aa15.8■□□□□ 0.12
PTPN18-212ENST00000483617 CCDC9Q9Y3X0 531 aaKnown RBP15.78■□□□□ 0.12
PTPN18-212ENST00000483617 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
PTPN18-212ENST00000483617 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
PTPN18-212ENST00000483617 NRKQ7Z2Y5 1582 aa15.76■□□□□ 0.11
PTPN18-212ENST00000483617 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
PTPN18-212ENST00000483617 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
PTPN18-212ENST00000483617 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
PTPN18-212ENST00000483617 SEPT12Q8IYM1 358 aa15.75■□□□□ 0.11
PTPN18-212ENST00000483617 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
PTPN18-212ENST00000483617 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
PTPN18-212ENST00000483617 ONECUT3O60422 494 aaPredicted RBP15.73■□□□□ 0.11
PTPN18-212ENST00000483617 TMF1P82094 1093 aa15.73■□□□□ 0.11
PTPN18-212ENST00000483617 CDCA8Q53HL2 280 aa15.73■□□□□ 0.11
PTPN18-212ENST00000483617 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
PTPN18-212ENST00000483617 ABTB2Q8N961 1025 aa15.73■□□□□ 0.11
PTPN18-212ENST00000483617 BRD4O60885 1362 aaPredicted RBP15.73■□□□□ 0.11
PTPN18-212ENST00000483617 USP6P35125 1406 aa15.72■□□□□ 0.11
PTPN18-212ENST00000483617 CCDC125Q86Z20 511 aa15.72■□□□□ 0.11
PTPN18-212ENST00000483617 USP19O94966 1318 aa15.71■□□□□ 0.11
PTPN18-212ENST00000483617 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
PTPN18-212ENST00000483617 CABP1Q9NZU7 370 aa15.71■□□□□ 0.11
PTPN18-212ENST00000483617 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 A0A0G2JS52 829 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
PTPN18-212ENST00000483617 MYT1Q01538 1121 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
PTPN18-212ENST00000483617 CHRNA2Q15822 529 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 FAM98CQ17RN3 349 aaKnown RBP15.7■□□□□ 0.1
PTPN18-212ENST00000483617 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 CCDC7Q96M83 1385 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
PTPN18-212ENST00000483617 CPDO75976 1380 aa15.69■□□□□ 0.1
PTPN18-212ENST00000483617 SBNO2Q9Y2G9 1366 aa15.69■□□□□ 0.1
PTPN18-212ENST00000483617 LMO7Q8WWI1 1683 aa15.69■□□□□ 0.1
PTPN18-212ENST00000483617 NLRP13Q86W25 1043 aa15.68■□□□□ 0.1
PTPN18-212ENST00000483617 SLIT3O75094 1523 aa15.68■□□□□ 0.1
PTPN18-212ENST00000483617 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
PTPN18-212ENST00000483617 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
PTPN18-212ENST00000483617 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
PTPN18-212ENST00000483617 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
PTPN18-212ENST00000483617 KIF7Q2M1P5 1343 aa15.67■□□□□ 0.1
PTPN18-212ENST00000483617 STRN4Q9NRL3 753 aa15.66■□□□□ 0.1
PTPN18-212ENST00000483617 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
PTPN18-212ENST00000483617 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
PTPN18-212ENST00000483617 GCP02774 474 aa15.65■□□□□ 0.1
PTPN18-212ENST00000483617 NLRP6P59044 892 aa15.64■□□□□ 0.09
PTPN18-212ENST00000483617 TESK2Q96S53 571 aa15.64■□□□□ 0.09
PTPN18-212ENST00000483617 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
PTPN18-212ENST00000483617 SF3B2Q13435 895 aaKnown RBP15.63■□□□□ 0.09
PTPN18-212ENST00000483617 COL5A2P05997 1499 aaPredicted RBP15.63■□□□□ 0.09
PTPN18-212ENST00000483617 EVA1CP58658 441 aa15.62■□□□□ 0.09
PTPN18-212ENST00000483617 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
PTPN18-212ENST00000483617 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
PTPN18-212ENST00000483617 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
PTPN18-212ENST00000483617 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
PTPN18-212ENST00000483617 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
PTPN18-212ENST00000483617 TTC21AQ8NDW8 1320 aa15.61■□□□□ 0.09
PTPN18-212ENST00000483617 RGPD1P0DJD0 1748 aa15.6■□□□□ 0.09
PTPN18-212ENST00000483617 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
PTPN18-212ENST00000483617 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
PTPN18-212ENST00000483617 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
PTPN18-212ENST00000483617 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
PTPN18-212ENST00000483617 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
PTPN18-212ENST00000483617 ANP32CO43423 234 aa15.59■□□□□ 0.09
PTPN18-212ENST00000483617 BARGINQ6ZT62 677 aa15.59■□□□□ 0.09
PTPN18-212ENST00000483617 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
PTPN18-212ENST00000483617 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
PTPN18-212ENST00000483617 FAM182BQ5T319 152 aa15.58■□□□□ 0.08
PTPN18-212ENST00000483617 COL18A1P39060 1754 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms