RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 DCAF8L1A6NGE4 600 aa23.19■■□□□ 1.3
HDLBP-238ENST00000479894 TRIM37O94972 964 aa23.19■■□□□ 1.3
HDLBP-238ENST00000479894 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
HDLBP-238ENST00000479894 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
HDLBP-238ENST00000479894 APBA3O96018 575 aa23.18■■□□□ 1.3
HDLBP-238ENST00000479894 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
HDLBP-238ENST00000479894 GPRASP1Q5JY77 1395 aa23.17■■□□□ 1.3
HDLBP-238ENST00000479894 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
HDLBP-238ENST00000479894 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
HDLBP-238ENST00000479894 NBPF8Q3BBV2 869 aa23.17■■□□□ 1.3
HDLBP-238ENST00000479894 NBPF14Q5TI25 921 aa23.17■■□□□ 1.3
HDLBP-238ENST00000479894 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
HDLBP-238ENST00000479894 DLC1Q96QB1 1528 aa23.16■■□□□ 1.3
HDLBP-238ENST00000479894 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
HDLBP-238ENST00000479894 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
HDLBP-238ENST00000479894 PRDM11Q9NQV5 511 aa23.13■■□□□ 1.29
HDLBP-238ENST00000479894 PPP1R1BQ9UD71 204 aaPredicted RBP23.13■■□□□ 1.29
HDLBP-238ENST00000479894 ACIN1Q9UKV3 1341 aaKnown RBP23.12■■□□□ 1.29
HDLBP-238ENST00000479894 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
HDLBP-238ENST00000479894 KCNQ2O43526 872 aa23.1■■□□□ 1.29
HDLBP-238ENST00000479894 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
HDLBP-238ENST00000479894 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
HDLBP-238ENST00000479894 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.29
HDLBP-238ENST00000479894 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
HDLBP-238ENST00000479894 BARGINQ6ZT62 677 aa23.08■■□□□ 1.29
HDLBP-238ENST00000479894 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
HDLBP-238ENST00000479894 CAMTA1Q9Y6Y1 1673 aa23.07■■□□□ 1.28
HDLBP-238ENST00000479894 POGKQ9P215 609 aa23.07■■□□□ 1.28
HDLBP-238ENST00000479894 PDE3BQ13370 1112 aa23.06■■□□□ 1.28
HDLBP-238ENST00000479894 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
HDLBP-238ENST00000479894 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
HDLBP-238ENST00000479894 CHD4Q14839 1912 aa23.05■■□□□ 1.28
HDLBP-238ENST00000479894 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
HDLBP-238ENST00000479894 C11orf95C9JLR9 678 aaPredicted RBP23.03■■□□□ 1.28
HDLBP-238ENST00000479894 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
HDLBP-238ENST00000479894 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
HDLBP-238ENST00000479894 PARP4Q9UKK3 1724 aaKnown RBP23.02■■□□□ 1.28
HDLBP-238ENST00000479894 CASZ1Q86V15 1759 aa23.01■■□□□ 1.27
HDLBP-238ENST00000479894 ATP7BP35670 1465 aa23.01■■□□□ 1.27
HDLBP-238ENST00000479894 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
HDLBP-238ENST00000479894 SSH2Q76I76 1423 aa23■■□□□ 1.27
HDLBP-238ENST00000479894 CHRNA2Q15822 529 aa23■■□□□ 1.27
HDLBP-238ENST00000479894 NGDNQ8NEJ9 315 aaKnown RBP23■■□□□ 1.27
HDLBP-238ENST00000479894 SBF2Q86WG5 1849 aa23■■□□□ 1.27
HDLBP-238ENST00000479894 ADGRB1O14514 1584 aa22.99■■□□□ 1.27
HDLBP-238ENST00000479894 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
HDLBP-238ENST00000479894 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
HDLBP-238ENST00000479894 ZNF784Q8NCA9 323 aaPredicted RBP22.97■■□□□ 1.27
HDLBP-238ENST00000479894 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
HDLBP-238ENST00000479894 THRAP3Q9Y2W1 955 aaKnown RBP22.97■■□□□ 1.27
HDLBP-238ENST00000479894 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
HDLBP-238ENST00000479894 EVA1CP58658 441 aa22.96■■□□□ 1.27
HDLBP-238ENST00000479894 TCP11L2Q8N4U5 519 aa22.96■■□□□ 1.27
HDLBP-238ENST00000479894 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
HDLBP-238ENST00000479894 LMO7Q8WWI1 1683 aa22.96■■□□□ 1.27
HDLBP-238ENST00000479894 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
HDLBP-238ENST00000479894 PLSCR1O15162 318 aa22.94■■□□□ 1.26
HDLBP-238ENST00000479894 ZC3H6P61129 1189 aaKnown RBP22.94■■□□□ 1.26
HDLBP-238ENST00000479894 MINK1Q8N4C8 1332 aaPredicted RBP22.93■■□□□ 1.26
HDLBP-238ENST00000479894 CPDO75976 1380 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 UTRNP46939 3433 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 MYOM1P52179 1685 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 TRAK1Q9UPV9 953 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 OVOS2A0A0G2JMS6 1433 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
HDLBP-238ENST00000479894 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
HDLBP-238ENST00000479894 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.25
HDLBP-238ENST00000479894 IFFO2Q5TF58 517 aa22.88■■□□□ 1.25
HDLBP-238ENST00000479894 C1QTNF8P60827 252 aa22.87■■□□□ 1.25
HDLBP-238ENST00000479894 ANO8Q9HCE9 1232 aaPredicted RBP22.87■■□□□ 1.25
HDLBP-238ENST00000479894 TOPAZ1Q8N9V7 1692 aa22.87■■□□□ 1.25
HDLBP-238ENST00000479894 POLR3AO14802 1390 aaPredicted RBP22.86■■□□□ 1.25
HDLBP-238ENST00000479894 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
HDLBP-238ENST00000479894 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
HDLBP-238ENST00000479894 LRRC37A3O60309 1634 aa22.85■■□□□ 1.25
HDLBP-238ENST00000479894 PTGER2P43116 358 aa22.84■■□□□ 1.25
HDLBP-238ENST00000479894 NUTM2GQ5VZR2 741 aa22.83■■□□□ 1.25
HDLBP-238ENST00000479894 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
HDLBP-238ENST00000479894 USP19O94966 1318 aa22.82■■□□□ 1.24
HDLBP-238ENST00000479894 CRB1P82279 1406 aa22.82■■□□□ 1.24
HDLBP-238ENST00000479894 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
HDLBP-238ENST00000479894 BCL11BQ9C0K0 894 aaPredicted RBP22.82■■□□□ 1.24
HDLBP-238ENST00000479894 WNK3Q9BYP7 1800 aa22.82■■□□□ 1.24
HDLBP-238ENST00000479894 SYT17Q9BSW7 474 aa22.81■■□□□ 1.24
HDLBP-238ENST00000479894 ZBTB7AO95365 584 aa22.8■■□□□ 1.24
HDLBP-238ENST00000479894 BCL9O00512 1426 aa22.8■■□□□ 1.24
HDLBP-238ENST00000479894 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
HDLBP-238ENST00000479894 ABTB2Q8N961 1025 aa22.79■■□□□ 1.24
HDLBP-238ENST00000479894 PDGFDQ9GZP0 370 aaPredicted RBP22.79■■□□□ 1.24
HDLBP-238ENST00000479894 ACEP12821 1306 aa22.79■■□□□ 1.24
HDLBP-238ENST00000479894 FHDC1Q9C0D6 1143 aaPredicted RBP22.78■■□□□ 1.24
HDLBP-238ENST00000479894 DDB1Q16531 1140 aa22.77■■□□□ 1.24
HDLBP-238ENST00000479894 PROM2Q8N271 834 aa22.77■■□□□ 1.24
HDLBP-238ENST00000479894 PLEKHG3A1L390 1219 aa22.76■■□□□ 1.23
HDLBP-238ENST00000479894 GCP02774 474 aa22.76■■□□□ 1.23
HDLBP-238ENST00000479894 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
HDLBP-238ENST00000479894 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
HDLBP-238ENST00000479894 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
HDLBP-238ENST00000479894 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms