RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
EWSR1-216ENST00000479135 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
EWSR1-216ENST00000479135 CAVIN1Q6NZI2 390 aaKnown RBP13.05□□□□□ -0.32
EWSR1-216ENST00000479135 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
EWSR1-216ENST00000479135 RABEP1Q15276 862 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 MACROD2A1Z1Q3 448 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
EWSR1-216ENST00000479135 NUTM2FA1L443 756 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 MNAT1P51948 309 aa13.04□□□□□ -0.32
EWSR1-216ENST00000479135 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
EWSR1-216ENST00000479135 KIF3CO14782 793 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
EWSR1-216ENST00000479135 TRDNQ13061 729 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
EWSR1-216ENST00000479135 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 FILIP1LQ4L180 1135 aa13.03□□□□□ -0.32
EWSR1-216ENST00000479135 NAT10Q9H0A0 1025 aaKnown RBP13.03□□□□□ -0.32
EWSR1-216ENST00000479135 MXRA7P84157 204 aa13.02□□□□□ -0.32
EWSR1-216ENST00000479135 FAM114A2Q9NRY5 505 aa13.02□□□□□ -0.32
EWSR1-216ENST00000479135 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.32
EWSR1-216ENST00000479135 CCDC96Q2M329 555 aa13.02□□□□□ -0.32
EWSR1-216ENST00000479135 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
EWSR1-216ENST00000479135 KIF3BO15066 747 aa13.02□□□□□ -0.33
EWSR1-216ENST00000479135 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
EWSR1-216ENST00000479135 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
EWSR1-216ENST00000479135 FEZ1Q99689 392 aa13.02□□□□□ -0.33
EWSR1-216ENST00000479135 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
EWSR1-216ENST00000479135 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 IFFO1Q0D2I5 559 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 SOGA1O94964 1423 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
EWSR1-216ENST00000479135 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
EWSR1-216ENST00000479135 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
EWSR1-216ENST00000479135 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
EWSR1-216ENST00000479135 ZNHIT6Q9NWK9 470 aaKnown RBP13□□□□□ -0.33
EWSR1-216ENST00000479135 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 SATB1Q01826 763 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 CEP120Q8N960 986 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
EWSR1-216ENST00000479135 DDX11Q96FC9 970 aa13□□□□□ -0.33
EWSR1-216ENST00000479135 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 MAFGO15525 162 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 ERLIN1O75477 346 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 SIN3AQ96ST3 1273 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 LETM1O95202 739 aaPredicted RBP12.99□□□□□ -0.33
EWSR1-216ENST00000479135 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 PPFIBP1Q86W92 1011 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
EWSR1-216ENST00000479135 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
EWSR1-216ENST00000479135 CCDC6Q16204 474 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 CA8P35219 290 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 FBF1Q8TES7 1133 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 KIF4AO95239 1232 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
EWSR1-216ENST00000479135 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
EWSR1-216ENST00000479135 FERP16591 822 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 IKBKGQ9Y6K9 419 aa12.98□□□□□ -0.33
EWSR1-216ENST00000479135 SH3BP5O60239 455 aa12.97□□□□□ -0.33
EWSR1-216ENST00000479135 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
EWSR1-216ENST00000479135 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
EWSR1-216ENST00000479135 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
EWSR1-216ENST00000479135 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
EWSR1-216ENST00000479135 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
EWSR1-216ENST00000479135 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
EWSR1-216ENST00000479135 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
EWSR1-216ENST00000479135 GNL1P36915 607 aaPredicted RBP12.97□□□□□ -0.33
EWSR1-216ENST00000479135 ATICP31939 592 aa12.96□□□□□ -0.33
EWSR1-216ENST00000479135 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.33
EWSR1-216ENST00000479135 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
EWSR1-216ENST00000479135 PPP1R9BQ96SB3 815 aa12.96□□□□□ -0.33
EWSR1-216ENST00000479135 TSPY26PQ9H489 355 aa12.96□□□□□ -0.33
EWSR1-216ENST00000479135 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.33
EWSR1-216ENST00000479135 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.34
EWSR1-216ENST00000479135 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.34
EWSR1-216ENST00000479135 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.34
EWSR1-216ENST00000479135 FRMD4BQ9Y2L6 1034 aa12.96□□□□□ -0.34
EWSR1-216ENST00000479135 TXLNAP40222 546 aa12.95□□□□□ -0.34
EWSR1-216ENST00000479135 STK3Q13188 491 aa12.95□□□□□ -0.34
EWSR1-216ENST00000479135 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
EWSR1-216ENST00000479135 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
EWSR1-216ENST00000479135 PRPF40AO75400 957 aaKnown RBP12.94□□□□□ -0.34
EWSR1-216ENST00000479135 SCLT1Q96NL6 688 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 IFIT2P09913 472 aaKnown RBP12.94□□□□□ -0.34
EWSR1-216ENST00000479135 PDE4AP27815 886 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
EWSR1-216ENST00000479135 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
EWSR1-216ENST00000479135 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms