RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 VAC14Q08AM6 782 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 NUTM2DQ5VT03 806 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 METTL3Q86U44 580 aaKnown RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 NPAS4Q8IUM7 802 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 NUTM2AQ8IVF1 878 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 MICAL1Q8TDZ2 1067 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 ZNF526Q8TF50 670 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 MAGEC2Q9UBF1 373 aaPredicted RBP3.99□□□□□ -1.77
HMGN4-202ENST00000477243 PPME1Q9Y570 386 aa3.99□□□□□ -1.77
HMGN4-202ENST00000477243 MAST4O15021 2626 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 SCAMP3O14828 347 aaKnown RBP3.98□□□□□ -1.77
HMGN4-202ENST00000477243 ATP9BO43861 1147 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 LILRB3O75022 631 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 COL19A1Q14993 1142 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 SOGA3Q5TF21 947 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 FBXO31Q5XUX0 539 aaPredicted RBP3.98□□□□□ -1.77
HMGN4-202ENST00000477243 PHLDB3Q6NSJ2 640 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 NUTM1Q86Y26 1132 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 EXOC8Q8IYI6 725 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 SPIRE2Q8WWL2 714 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 ARMC5Q96C12 935 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 GJD4Q96KN9 370 aaPredicted RBP3.98□□□□□ -1.77
HMGN4-202ENST00000477243 P2RX7Q99572 595 aaKnown RBP3.98□□□□□ -1.77
HMGN4-202ENST00000477243 SBNO2Q9Y2G9 1366 aa3.98□□□□□ -1.77
HMGN4-202ENST00000477243 MAP3K13O43283 966 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 TPD52L2O43399 206 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 RAB11FIP3O75154 756 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 ATP2B1P20020 1258 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 TSNAXIP1Q2TAA8 658 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 NOM1Q5C9Z4 860 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 TMEM164Q5U3C3 297 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 CHADLQ6NUI6 762 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 RSBN1LQ6PCB5 846 aaPredicted RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 LURAP1LQ8IV03 231 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 ZSCAN29Q8IWY8 852 aaPredicted RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 ZCRB1Q8TBF4 217 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 RBM46Q8TBY0 533 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 KIF12Q96FN5 646 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 UCN2Q96RP3 112 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 RBM42Q9BTD8 480 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 TANGO6Q9C0B7 1094 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 NPDC1Q9NQX5 325 aaPredicted RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 NLRP2Q9NX02 1062 aa3.97□□□□□ -1.77
HMGN4-202ENST00000477243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 NOVA2Q9UNW9 492 aaKnown RBP3.97□□□□□ -1.77
HMGN4-202ENST00000477243 hCG_2014768A0A024R1R8 64 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 RECKO95980 971 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 NEFLP07196 543 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 EIF4G2P78344 907 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGN4-202ENST00000477243 FGD1P98174 961 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 GNL2Q13823 731 aaKnown RBP3.96□□□□□ -1.78
HMGN4-202ENST00000477243 KANK4Q5T7N3 995 aaPredicted RBP3.96□□□□□ -1.78
HMGN4-202ENST00000477243 ZNF662Q6ZS27 426 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 SLC43A3Q8NBI5 491 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 PRR7Q8TB68 274 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 PIK3R5Q8WYR1 880 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 EPAS1Q99814 870 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 BRINP2Q9C0B6 783 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 PRDM16Q9HAZ2 1276 aa3.96□□□□□ -1.78
HMGN4-202ENST00000477243 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGN4-202ENST00000477243 FARP1Q9Y4F1 1045 aaPredicted RBP3.96□□□□□ -1.78
HMGN4-202ENST00000477243 PIEZO1Q92508 2521 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 ATAD2Q6PL18 1390 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 KRT38O76015 456 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 MCCD1P59942 119 aaPredicted RBP3.95□□□□□ -1.78
HMGN4-202ENST00000477243 ANAPC15P60006 121 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 EN1Q05925 392 aaPredicted RBP3.95□□□□□ -1.78
HMGN4-202ENST00000477243 CSPP1Q1MSJ5 1256 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 EGFLAMQ63HQ2 1017 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 TMED8Q6PL24 325 aaPredicted RBP3.95□□□□□ -1.78
HMGN4-202ENST00000477243 TBC1D9Q6ZT07 1266 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 FBXO33Q7Z6M2 555 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 SULF1Q8IWU6 871 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 REM2Q8IYK8 340 aaPredicted RBP3.95□□□□□ -1.78
HMGN4-202ENST00000477243 NFATC2IPQ8NCF5 419 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 MORC4Q8TE76 937 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 PXYLP1Q8TE99 480 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 LNPKQ9C0E8 428 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 RBM27Q9P2N5 1060 aaKnown RBP3.95□□□□□ -1.78
HMGN4-202ENST00000477243 SUGT1Q9Y2Z0 365 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 SCRIBQ14160 1630 aa3.95□□□□□ -1.78
HMGN4-202ENST00000477243 NINLQ9Y2I6 1382 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 FAM196BA6NMK8 535 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 MAP3K7O43318 606 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 EVI5O60447 810 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 PRIM1P49642 420 aaKnown RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 SETQ01105 290 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 COL9A2Q14055 689 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 QPCTQ16769 361 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 PTPROQ16827 1216 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 EAPPQ56P03 285 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 HSP90AB4PQ58FF6 505 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 RTL5Q5HYW3 569 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 ZNF772Q68DY9 489 aaPredicted RBP3.94□□□□□ -1.78
HMGN4-202ENST00000477243 SDE2Q6IQ49 451 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 LARGE2Q8N3Y3 721 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 C1orf216Q8TAB5 229 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 FAM200AQ8TCP9 573 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 KCNB2Q92953 911 aa3.94□□□□□ -1.78
HMGN4-202ENST00000477243 CLP1Q92989 425 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms