RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 WNT7BP56706 349 aa10.81□□□□□ -0.68
LTN1-204ENST00000475344 LCE2BO14633 110 aa10.8□□□□□ -0.68
LTN1-204ENST00000475344 BAP1Q92560 729 aa10.8□□□□□ -0.68
LTN1-204ENST00000475344 EHBP1Q8NDI1 1231 aa10.79□□□□□ -0.68
LTN1-204ENST00000475344 DGAT1O75907 488 aa10.78□□□□□ -0.68
LTN1-204ENST00000475344 SH3BP2P78314 561 aa10.78□□□□□ -0.68
LTN1-204ENST00000475344 FBXO31Q5XUX0 539 aaPredicted RBP10.78□□□□□ -0.68
LTN1-204ENST00000475344 TOR4AQ9NXH8 423 aa10.78□□□□□ -0.68
LTN1-204ENST00000475344 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
LTN1-204ENST00000475344 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
LTN1-204ENST00000475344 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
LTN1-204ENST00000475344 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
LTN1-204ENST00000475344 MYT1Q01538 1121 aa10.75□□□□□ -0.69
LTN1-204ENST00000475344 ZNF511Q8NB15 262 aa10.75□□□□□ -0.69
LTN1-204ENST00000475344 PCMTD1Q96MG8 357 aaPredicted RBP10.75□□□□□ -0.69
LTN1-204ENST00000475344 AP1G2O75843 785 aa10.74□□□□□ -0.69
LTN1-204ENST00000475344 J3QL48 77 aa10.73□□□□□ -0.69
LTN1-204ENST00000475344 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
LTN1-204ENST00000475344 AGERQ15109 404 aa10.72□□□□□ -0.69
LTN1-204ENST00000475344 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
LTN1-204ENST00000475344 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
LTN1-204ENST00000475344 SMPD1P17405 629 aa10.71□□□□□ -0.69
LTN1-204ENST00000475344 PPP2R2DQ66LE6 453 aa10.71□□□□□ -0.69
LTN1-204ENST00000475344 FOXJ1Q92949 421 aa10.7□□□□□ -0.7
LTN1-204ENST00000475344 RFC5P40937 340 aa10.68□□□□□ -0.7
LTN1-204ENST00000475344 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
LTN1-204ENST00000475344 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
LTN1-204ENST00000475344 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
LTN1-204ENST00000475344 SIAH2O43255 324 aa10.67□□□□□ -0.7
LTN1-204ENST00000475344 VARSP26640 1264 aaKnown RBP10.67□□□□□ -0.7
LTN1-204ENST00000475344 ARMC2Q8NEN0 867 aa10.67□□□□□ -0.7
LTN1-204ENST00000475344 NR6A1Q15406 480 aa10.66□□□□□ -0.7
LTN1-204ENST00000475344 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
LTN1-204ENST00000475344 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
LTN1-204ENST00000475344 AXIN1O15169 862 aa10.65□□□□□ -0.7
LTN1-204ENST00000475344 USP17L8P0C7I0 530 aa10.65□□□□□ -0.7
LTN1-204ENST00000475344 ARID5BQ14865 1188 aa10.65□□□□□ -0.7
LTN1-204ENST00000475344 HPS1Q92902 700 aa10.65□□□□□ -0.7
LTN1-204ENST00000475344 MAGEB6P1A0A0J9YX57 407 aa10.64□□□□□ -0.71
LTN1-204ENST00000475344 AVPP01185 164 aa10.64□□□□□ -0.71
LTN1-204ENST00000475344 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
LTN1-204ENST00000475344 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
LTN1-204ENST00000475344 BPHLQ86WA6 291 aaPredicted RBP10.63□□□□□ -0.71
LTN1-204ENST00000475344 CARD14Q9BXL6 1004 aa10.63□□□□□ -0.71
LTN1-204ENST00000475344 CTC1Q2NKJ3 1217 aa10.62□□□□□ -0.71
LTN1-204ENST00000475344 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
LTN1-204ENST00000475344 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
LTN1-204ENST00000475344 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
LTN1-204ENST00000475344 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
LTN1-204ENST00000475344 FKBPLQ9UIM3 349 aa10.61□□□□□ -0.71
LTN1-204ENST00000475344 TMEM259Q4ZIN3 620 aa10.59□□□□□ -0.71
LTN1-204ENST00000475344 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
LTN1-204ENST00000475344 POTECB2RU33 542 aa10.58□□□□□ -0.72
LTN1-204ENST00000475344 SMCPP49901 116 aaPredicted RBP10.57□□□□□ -0.72
LTN1-204ENST00000475344 NNTQ13423 1086 aa10.57□□□□□ -0.72
LTN1-204ENST00000475344 SH3BP5LQ7L8J4 393 aa10.57□□□□□ -0.72
LTN1-204ENST00000475344 GPKOWQ92917 476 aaPredicted RBP eCLIP10.57□□□□□ -0.729e-6■■□□□ 14.5
LTN1-204ENST00000475344 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
LTN1-204ENST00000475344 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
LTN1-204ENST00000475344 ADH1CP00326 375 aa10.55□□□□□ -0.72
LTN1-204ENST00000475344 ZBTB33Q86T24 672 aa10.55□□□□□ -0.72
LTN1-204ENST00000475344 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
LTN1-204ENST00000475344 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
LTN1-204ENST00000475344 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
LTN1-204ENST00000475344 MPNDQ8N594 471 aa10.54□□□□□ -0.72
LTN1-204ENST00000475344 GMPR2Q9P2T1 348 aaKnown RBP10.54□□□□□ -0.72
LTN1-204ENST00000475344 VASH1Q7L8A9 365 aaPredicted RBP10.53□□□□□ -0.72
LTN1-204ENST00000475344 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
LTN1-204ENST00000475344 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
LTN1-204ENST00000475344 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
LTN1-204ENST00000475344 C1QTNF2Q9BXJ5 285 aa10.52□□□□□ -0.73
LTN1-204ENST00000475344 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
LTN1-204ENST00000475344 FSHRP23945 695 aa10.51□□□□□ -0.73
LTN1-204ENST00000475344 WDR4P57081 412 aaKnown RBP10.51□□□□□ -0.73
LTN1-204ENST00000475344 PTK2Q05397 1052 aa10.51□□□□□ -0.73
LTN1-204ENST00000475344 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
LTN1-204ENST00000475344 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
LTN1-204ENST00000475344 BMP1P13497 986 aa10.5□□□□□ -0.73
LTN1-204ENST00000475344 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
LTN1-204ENST00000475344 NR5A1Q13285 461 aa10.49□□□□□ -0.73
LTN1-204ENST00000475344 NR3C2P08235 984 aa10.48□□□□□ -0.73
LTN1-204ENST00000475344 GRM5P41594 1212 aa10.48□□□□□ -0.73
LTN1-204ENST00000475344 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
LTN1-204ENST00000475344 ZIC2O95409 532 aaPredicted RBP10.47□□□□□ -0.73
LTN1-204ENST00000475344 TIMP2P16035 220 aa10.47□□□□□ -0.73
LTN1-204ENST00000475344 ADAM32Q8TC27 787 aa10.47□□□□□ -0.73
LTN1-204ENST00000475344 OCSTAMPQ9BR26 566 aa10.47□□□□□ -0.73
LTN1-204ENST00000475344 BANK1Q8NDB2 785 aa10.46□□□□□ -0.73
LTN1-204ENST00000475344 GJD4Q96KN9 370 aaPredicted RBP10.46□□□□□ -0.73
LTN1-204ENST00000475344 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.73
LTN1-204ENST00000475344 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
LTN1-204ENST00000475344 MAP4K5Q9Y4K4 846 aa10.46□□□□□ -0.73
LTN1-204ENST00000475344 ITPKCQ96DU7 683 aa10.45□□□□□ -0.74
LTN1-204ENST00000475344 TRIM46Q7Z4K8 759 aa10.44□□□□□ -0.74
LTN1-204ENST00000475344 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
LTN1-204ENST00000475344 MTMR14Q8NCE2 650 aa10.44□□□□□ -0.74
LTN1-204ENST00000475344 SENP2Q9HC62 589 aa10.44□□□□□ -0.74
LTN1-204ENST00000475344 GPSM3Q9Y4H4 160 aa10.44□□□□□ -0.74
LTN1-204ENST00000475344 RAB15P59190 212 aa10.43□□□□□ -0.74
LTN1-204ENST00000475344 CCDC116Q8IYX3 515 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms