RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
HIGD1A-205ENST00000470543 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
HIGD1A-205ENST00000470543 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
HIGD1A-205ENST00000470543 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
HIGD1A-205ENST00000470543 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
HIGD1A-205ENST00000470543 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
HIGD1A-205ENST00000470543 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
HIGD1A-205ENST00000470543 PAK3O75914 559 aaPredicted RBP18.54■□□□□ 0.56
HIGD1A-205ENST00000470543 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
HIGD1A-205ENST00000470543 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
HIGD1A-205ENST00000470543 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
HIGD1A-205ENST00000470543 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
HIGD1A-205ENST00000470543 EZH2Q15910 746 aaKnown RBP18.53■□□□□ 0.56
HIGD1A-205ENST00000470543 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
HIGD1A-205ENST00000470543 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
HIGD1A-205ENST00000470543 TRIM37O94972 964 aa18.5■□□□□ 0.55
HIGD1A-205ENST00000470543 STRN4Q9NRL3 753 aa18.5■□□□□ 0.55
HIGD1A-205ENST00000470543 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
HIGD1A-205ENST00000470543 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
HIGD1A-205ENST00000470543 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
HIGD1A-205ENST00000470543 PARD3Q8TEW0 1356 aa18.49■□□□□ 0.55
HIGD1A-205ENST00000470543 APBA3O96018 575 aa18.48■□□□□ 0.55
HIGD1A-205ENST00000470543 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
HIGD1A-205ENST00000470543 RREB1Q92766 1687 aa18.47■□□□□ 0.55
HIGD1A-205ENST00000470543 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
HIGD1A-205ENST00000470543 KIAA0232Q92628 1395 aa18.47■□□□□ 0.55
HIGD1A-205ENST00000470543 NUP188Q5SRE5 1749 aa18.47■□□□□ 0.55
HIGD1A-205ENST00000470543 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
HIGD1A-205ENST00000470543 YY1P25490 414 aa18.46■□□□□ 0.55
HIGD1A-205ENST00000470543 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
HIGD1A-205ENST00000470543 ATP7BP35670 1465 aa18.46■□□□□ 0.54
HIGD1A-205ENST00000470543 CHRNA2Q15822 529 aa18.45■□□□□ 0.54
HIGD1A-205ENST00000470543 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
HIGD1A-205ENST00000470543 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
HIGD1A-205ENST00000470543 CAMKK2Q96RR4 588 aa18.45■□□□□ 0.54
HIGD1A-205ENST00000470543 PPP1R1BQ9UD71 204 aaPredicted RBP18.45■□□□□ 0.54
HIGD1A-205ENST00000470543 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
HIGD1A-205ENST00000470543 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
HIGD1A-205ENST00000470543 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
HIGD1A-205ENST00000470543 EVA1CP58658 441 aa18.43■□□□□ 0.54
HIGD1A-205ENST00000470543 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
HIGD1A-205ENST00000470543 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
HIGD1A-205ENST00000470543 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
HIGD1A-205ENST00000470543 NUTM2GQ5VZR2 741 aa18.4■□□□□ 0.54
HIGD1A-205ENST00000470543 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
HIGD1A-205ENST00000470543 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
HIGD1A-205ENST00000470543 BARGINQ6ZT62 677 aa18.37■□□□□ 0.53
HIGD1A-205ENST00000470543 SPON1Q9HCB6 807 aa18.37■□□□□ 0.53
HIGD1A-205ENST00000470543 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
HIGD1A-205ENST00000470543 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
HIGD1A-205ENST00000470543 NUDT16Q96DE0 195 aaKnown RBP18.36■□□□□ 0.53
HIGD1A-205ENST00000470543 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
HIGD1A-205ENST00000470543 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
HIGD1A-205ENST00000470543 NINLQ9Y2I6 1382 aa18.34■□□□□ 0.53
HIGD1A-205ENST00000470543 MSH5O43196 834 aa18.34■□□□□ 0.53
HIGD1A-205ENST00000470543 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
HIGD1A-205ENST00000470543 KCNQ2O43526 872 aa18.33■□□□□ 0.52
HIGD1A-205ENST00000470543 LMO7Q8WWI1 1683 aa18.33■□□□□ 0.52
HIGD1A-205ENST00000470543 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
HIGD1A-205ENST00000470543 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
HIGD1A-205ENST00000470543 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
HIGD1A-205ENST00000470543 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
HIGD1A-205ENST00000470543 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
HIGD1A-205ENST00000470543 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
HIGD1A-205ENST00000470543 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
HIGD1A-205ENST00000470543 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
HIGD1A-205ENST00000470543 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
HIGD1A-205ENST00000470543 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
HIGD1A-205ENST00000470543 ACEP12821 1306 aa18.3■□□□□ 0.52
HIGD1A-205ENST00000470543 ZBTB7CA1YPR0 619 aa18.3■□□□□ 0.52
HIGD1A-205ENST00000470543 CDK19Q9BWU1 502 aa18.3■□□□□ 0.52
HIGD1A-205ENST00000470543 CPDO75976 1380 aa18.3■□□□□ 0.52
HIGD1A-205ENST00000470543 STAC3Q96MF2 364 aa18.28■□□□□ 0.52
HIGD1A-205ENST00000470543 RAB3GAP2Q9H2M9 1393 aa18.28■□□□□ 0.52
HIGD1A-205ENST00000470543 LRRC37A3O60309 1634 aa18.27■□□□□ 0.52
HIGD1A-205ENST00000470543 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
HIGD1A-205ENST00000470543 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
HIGD1A-205ENST00000470543 SBF2Q86WG5 1849 aa18.27■□□□□ 0.52
HIGD1A-205ENST00000470543 USP19O94966 1318 aa18.26■□□□□ 0.51
HIGD1A-205ENST00000470543 CRB1P82279 1406 aa18.26■□□□□ 0.51
HIGD1A-205ENST00000470543 NLRP13Q86W25 1043 aa18.26■□□□□ 0.51
HIGD1A-205ENST00000470543 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
HIGD1A-205ENST00000470543 PEAK1Q9H792 1746 aa18.25■□□□□ 0.51
HIGD1A-205ENST00000470543 WNK3Q9BYP7 1800 aa18.25■□□□□ 0.51
HIGD1A-205ENST00000470543 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
HIGD1A-205ENST00000470543 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
HIGD1A-205ENST00000470543 DDB1Q16531 1140 aa18.23■□□□□ 0.51
HIGD1A-205ENST00000470543 BCL11BQ9C0K0 894 aaPredicted RBP18.23■□□□□ 0.51
HIGD1A-205ENST00000470543 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
HIGD1A-205ENST00000470543 MYOM1P52179 1685 aa18.22■□□□□ 0.51
HIGD1A-205ENST00000470543 PLEKHG3A1L390 1219 aa18.22■□□□□ 0.51
HIGD1A-205ENST00000470543 GCP02774 474 aa18.22■□□□□ 0.51
HIGD1A-205ENST00000470543 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
HIGD1A-205ENST00000470543 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
HIGD1A-205ENST00000470543 PLSCR1O15162 318 aa18.2■□□□□ 0.5
HIGD1A-205ENST00000470543 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
HIGD1A-205ENST00000470543 ZBTB7AO95365 584 aa18.19■□□□□ 0.5
HIGD1A-205ENST00000470543 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
HIGD1A-205ENST00000470543 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
HIGD1A-205ENST00000470543 NLRP6P59044 892 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms