RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
UBE3C-204ENST00000469336 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
UBE3C-204ENST00000469336 CTHP32929 405 aa11.31□□□□□ -0.6
UBE3C-204ENST00000469336 LYPD8Q6UX82 237 aa11.31□□□□□ -0.6
UBE3C-204ENST00000469336 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
UBE3C-204ENST00000469336 HPS1Q92902 700 aa11.31□□□□□ -0.6
UBE3C-204ENST00000469336 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
UBE3C-204ENST00000469336 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
UBE3C-204ENST00000469336 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
UBE3C-204ENST00000469336 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 SIAH2O43255 324 aa11.29□□□□□ -0.6
UBE3C-204ENST00000469336 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
UBE3C-204ENST00000469336 LILRB3O75022 631 aa11.28□□□□□ -0.6
UBE3C-204ENST00000469336 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
UBE3C-204ENST00000469336 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
UBE3C-204ENST00000469336 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
UBE3C-204ENST00000469336 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
UBE3C-204ENST00000469336 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
UBE3C-204ENST00000469336 ZNF511Q8NB15 262 aa11.26□□□□□ -0.61
UBE3C-204ENST00000469336 F12P00748 615 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-204ENST00000469336 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
UBE3C-204ENST00000469336 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
UBE3C-204ENST00000469336 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
UBE3C-204ENST00000469336 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
UBE3C-204ENST00000469336 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
UBE3C-204ENST00000469336 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
UBE3C-204ENST00000469336 ATP13A2Q9NQ11 1180 aa11.21□□□□□ -0.61
UBE3C-204ENST00000469336 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-204ENST00000469336 WASF2Q9Y6W5 498 aa11.2□□□□□ -0.62
UBE3C-204ENST00000469336 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
UBE3C-204ENST00000469336 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
UBE3C-204ENST00000469336 VARSP26640 1264 aaKnown RBP11.17□□□□□ -0.62
UBE3C-204ENST00000469336 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
UBE3C-204ENST00000469336 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
UBE3C-204ENST00000469336 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
UBE3C-204ENST00000469336 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-204ENST00000469336 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-204ENST00000469336 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-204ENST00000469336 BMP1P13497 986 aa11.15□□□□□ -0.62
UBE3C-204ENST00000469336 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
UBE3C-204ENST00000469336 AGERQ15109 404 aa11.14□□□□□ -0.63
UBE3C-204ENST00000469336 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
UBE3C-204ENST00000469336 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
UBE3C-204ENST00000469336 CAPN5O15484 640 aaPredicted RBP11.12□□□□□ -0.63
UBE3C-204ENST00000469336 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBE3C-204ENST00000469336 NNTQ13423 1086 aa11.11□□□□□ -0.63
UBE3C-204ENST00000469336 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
UBE3C-204ENST00000469336 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
UBE3C-204ENST00000469336 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
UBE3C-204ENST00000469336 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
UBE3C-204ENST00000469336 MPNDQ8N594 471 aa11.08□□□□□ -0.64
UBE3C-204ENST00000469336 BPHLQ86WA6 291 aaPredicted RBP11.07□□□□□ -0.64
UBE3C-204ENST00000469336 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 AP1G2O75843 785 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 ADH1CP00326 375 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 WDR4P57081 412 aaKnown RBP11.06□□□□□ -0.64
UBE3C-204ENST00000469336 NR6A1Q15406 480 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
UBE3C-204ENST00000469336 NR3C2P08235 984 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 TIMP2P16035 220 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
UBE3C-204ENST00000469336 GRM5P41594 1212 aa11.04□□□□□ -0.64
UBE3C-204ENST00000469336 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
UBE3C-204ENST00000469336 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
UBE3C-204ENST00000469336 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
UBE3C-204ENST00000469336 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
UBE3C-204ENST00000469336 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
UBE3C-204ENST00000469336 EPS8L1Q8TE68 723 aa11.03□□□□□ -0.64
UBE3C-204ENST00000469336 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
UBE3C-204ENST00000469336 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
UBE3C-204ENST00000469336 ITPKCQ96DU7 683 aa11.01□□□□□ -0.65
UBE3C-204ENST00000469336 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
UBE3C-204ENST00000469336 HMX1Q9NP08 348 aaPredicted RBP11.01□□□□□ -0.65
UBE3C-204ENST00000469336 ZIC2O95409 532 aaPredicted RBP11□□□□□ -0.65
UBE3C-204ENST00000469336 NFX1Q12986 1120 aaKnown RBP11□□□□□ -0.65
UBE3C-204ENST00000469336 KIFC2Q96AC6 838 aa11□□□□□ -0.65
UBE3C-204ENST00000469336 WFS1O76024 890 aa10.99□□□□□ -0.65
UBE3C-204ENST00000469336 FSHRP23945 695 aa10.99□□□□□ -0.65
UBE3C-204ENST00000469336 LCE2CQ5TA81 110 aa10.99□□□□□ -0.65
UBE3C-204ENST00000469336 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
UBE3C-204ENST00000469336 FKBPLQ9UIM3 349 aa10.99□□□□□ -0.65
UBE3C-204ENST00000469336 RFC5P40937 340 aa10.98□□□□□ -0.65
UBE3C-204ENST00000469336 FLIIQ13045 1269 aa10.98□□□□□ -0.65
UBE3C-204ENST00000469336 NR5A1Q13285 461 aa10.98□□□□□ -0.65
UBE3C-204ENST00000469336 ERFEQ4G0M1 354 aa10.98□□□□□ -0.65
UBE3C-204ENST00000469336 MRPL14Q6P1L8 145 aaKnown RBP10.98□□□□□ -0.65
UBE3C-204ENST00000469336 VASH1Q7L8A9 365 aaPredicted RBP10.98□□□□□ -0.65
UBE3C-204ENST00000469336 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
UBE3C-204ENST00000469336 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
UBE3C-204ENST00000469336 OCSTAMPQ9BR26 566 aa10.96□□□□□ -0.65
UBE3C-204ENST00000469336 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms