RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 NEUROD6Q96NK8 337 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF2CQ99661 725 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NCAPGQ9BPX3 1015 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ARPC5LQ9BPX5 153 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SPOCK3Q9BQ16 436 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 C22orf23Q9BZE7 217 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 DEF6Q9H4E7 631 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SENP3Q9H4L4 574 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CXorf56Q9H5V9 222 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 METTL14Q9HCE5 456 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ARHGEF10LQ9HCE6 1279 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 BRMS1Q9HCU9 246 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CWC15Q9P013 229 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CPSF2Q9P2I0 782 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KLHL42Q9P2K6 505 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 GABBR1Q9UBS5 961 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RSPH14Q9UHP6 348 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 PUF60Q9UHX1 559 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 FEZ2Q9UHY8 353 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF777Q9ULD5 760 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RABL2BQ9UNT1 228 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 IQSEC3Q9UPP2 1182 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 DIS3Q9Y2L1 958 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KNSTRNQ9Y448 316 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 V9GYY5 206 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ZCCHC6Q5VYS8 1495 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RPGRIP1LQ68CZ1 1315 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NISCHQ9Y2I1 1504 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 EEA1Q15075 1411 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CARNS1A5YM72 827 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 UNCXA6NJT0 531 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 HMGB1P1B2RPK0 211 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ELL2O00472 640 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 PPP1R12AO14974 1030 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RGL2O15211 777 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 HTATSF1O43719 755 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CREB3O43889 395 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF5CO60282 957 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 PPFIA4O75335 1185 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 OFD1O75665 1012 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 NEBLO76041 1014 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 OATP04181 439 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC175P0C221 793 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 SKILP12757 684 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CAPN2P17655 700 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 XBP1P17861 261 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ATP6V1AP38606 617 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 SLC4A3P48751 1232 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 FAM160A1Q05DH4 1040 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 MKRN3Q13064 507 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 PKD2Q13563 968 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 IRF5Q13568 498 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 BECN1Q14457 450 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 SART3Q15020 963 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ZSCAN26Q16670 478 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC31Q49AM3 519 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 MAP9Q49MG5 647 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 AKNAD1Q5T1N1 836 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 C1QTNF12Q5T7M4 302 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 DUSP27Q5VZP5 1158 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ICE2Q659A1 982 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 WWC2Q6AWC2 1192 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC19Q6DKK2 380 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TTLL5Q6EMB2 1281 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 C16orf87Q6PH81 154 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 SASS6Q6UVJ0 657 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 NFXL1Q6ZNB6 911 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM74Q86UV6 250 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM73Q86UV7 250 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 DZIP1Q86YF9 867 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 MYLK4Q86YV6 388 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RPUSD2Q8IZ73 545 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 OGFOD1Q8N543 542 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 JMYQ8N9B5 988 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 FAM184AQ8NB25 1140 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 KLHL23Q8NBE8 558 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 RETREG2Q8NC44 543 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 C1orf131Q8NDD1 294 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 PHC3Q8NDX5 983 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ANKRD20A12PQ8NF67 263 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 HELBQ8NG08 1087 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 GIMAP7Q8NHV1 300 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 UHMK1Q8TAS1 419 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 C17orf50Q8WW18 174 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 PMM1Q92871 262 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ERCC4Q92889 916 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TNPO1Q92973 898 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC47Q96A33 483 aaKnown RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM11Q96F44 468 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 BORCS6Q96GS4 357 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 MRFAP1L1Q96HT8 127 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 SPATA32Q96LK8 384 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF396Q96N95 335 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC85AQ96PX6 553 aaPredicted RBP1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 FMNL2Q96PY5 1086 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 CEP89Q96ST8 783 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TRAIPQ9BWF2 469 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 LRRC27Q9C0I9 530 aa1.09□□□□□ -2.23
RPL39P28-201ENST00000465655 TSPYL2Q9H2G4 693 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms