RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
TM9SF3-203ENST00000464654 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
TM9SF3-203ENST00000464654 AVPP01185 164 aa8.39□□□□□ -1.07
TM9SF3-203ENST00000464654 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
TM9SF3-203ENST00000464654 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 CTHP32929 405 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 SH3BP2P78314 561 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 MYT1Q01538 1121 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 TSC1Q92574 1164 aa8.38□□□□□ -1.07
TM9SF3-203ENST00000464654 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
TM9SF3-203ENST00000464654 BAP1Q92560 729 aa8.37□□□□□ -1.07
TM9SF3-203ENST00000464654 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
TM9SF3-203ENST00000464654 CTC1Q2NKJ3 1217 aa8.36□□□□□ -1.07
TM9SF3-203ENST00000464654 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
TM9SF3-203ENST00000464654 SIAH2O43255 324 aa8.35□□□□□ -1.07
TM9SF3-203ENST00000464654 SMPD1P17405 629 aa8.35□□□□□ -1.07
TM9SF3-203ENST00000464654 VARSP26640 1264 aaKnown RBP8.35□□□□□ -1.07
TM9SF3-203ENST00000464654 MPNDQ8N594 471 aa8.35□□□□□ -1.07
TM9SF3-203ENST00000464654 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
TM9SF3-203ENST00000464654 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
TM9SF3-203ENST00000464654 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
TM9SF3-203ENST00000464654 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
TM9SF3-203ENST00000464654 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
TM9SF3-203ENST00000464654 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-203ENST00000464654 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.08
TM9SF3-203ENST00000464654 ATP1B4Q9UN42 357 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-203ENST00000464654 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
TM9SF3-203ENST00000464654 J3QL48 77 aa8.31□□□□□ -1.08
TM9SF3-203ENST00000464654 RFC5P40937 340 aa8.31□□□□□ -1.08
TM9SF3-203ENST00000464654 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-203ENST00000464654 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
TM9SF3-203ENST00000464654 TMEM259Q4ZIN3 620 aa8.3□□□□□ -1.08
TM9SF3-203ENST00000464654 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
TM9SF3-203ENST00000464654 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
TM9SF3-203ENST00000464654 AP1G2O75843 785 aa8.29□□□□□ -1.08
TM9SF3-203ENST00000464654 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
TM9SF3-203ENST00000464654 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
TM9SF3-203ENST00000464654 AXIN1O15169 862 aa8.28□□□□□ -1.08
TM9SF3-203ENST00000464654 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
TM9SF3-203ENST00000464654 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
TM9SF3-203ENST00000464654 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
TM9SF3-203ENST00000464654 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
TM9SF3-203ENST00000464654 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
TM9SF3-203ENST00000464654 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
TM9SF3-203ENST00000464654 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
TM9SF3-203ENST00000464654 HPS1Q92902 700 aa8.26□□□□□ -1.09
TM9SF3-203ENST00000464654 SOCS7O14512 581 aa8.25□□□□□ -1.09
TM9SF3-203ENST00000464654 AGERQ15109 404 aa8.25□□□□□ -1.09
TM9SF3-203ENST00000464654 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
TM9SF3-203ENST00000464654 TRMT44Q8IYL2 757 aaKnown RBP8.25□□□□□ -1.09
TM9SF3-203ENST00000464654 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
TM9SF3-203ENST00000464654 ADH1CP00326 375 aa8.24□□□□□ -1.09
TM9SF3-203ENST00000464654 PRKCSHP14314 528 aaPredicted RBP8.24□□□□□ -1.09
TM9SF3-203ENST00000464654 NR6A1Q15406 480 aa8.24□□□□□ -1.09
TM9SF3-203ENST00000464654 MAP4K5Q9Y4K4 846 aa8.24□□□□□ -1.09
TM9SF3-203ENST00000464654 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
TM9SF3-203ENST00000464654 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
TM9SF3-203ENST00000464654 NR5A1Q13285 461 aa8.22□□□□□ -1.09
TM9SF3-203ENST00000464654 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
TM9SF3-203ENST00000464654 PTK2Q05397 1052 aa8.2□□□□□ -1.1
TM9SF3-203ENST00000464654 NNTQ13423 1086 aa8.2□□□□□ -1.1
TM9SF3-203ENST00000464654 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
TM9SF3-203ENST00000464654 ARHGAP9Q9BRR9 750 aa8.2□□□□□ -1.1
TM9SF3-203ENST00000464654 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
TM9SF3-203ENST00000464654 GRM5P41594 1212 aa8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 ERFEQ4G0M1 354 aa8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 ATP13A2Q9NQ11 1180 aa8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
TM9SF3-203ENST00000464654 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
TM9SF3-203ENST00000464654 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
TM9SF3-203ENST00000464654 ARID5BQ14865 1188 aa8.18□□□□□ -1.1
TM9SF3-203ENST00000464654 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
TM9SF3-203ENST00000464654 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
TM9SF3-203ENST00000464654 POTECB2RU33 542 aa8.17□□□□□ -1.1
TM9SF3-203ENST00000464654 APBB1O00213 710 aa8.17□□□□□ -1.1
TM9SF3-203ENST00000464654 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
TM9SF3-203ENST00000464654 STK17AQ9UEE5 414 aa8.17□□□□□ -1.1
TM9SF3-203ENST00000464654 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 CARD14Q9BXL6 1004 aa8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 GMPR2Q9P2T1 348 aaKnown RBP8.16□□□□□ -1.1
TM9SF3-203ENST00000464654 TIMP2P16035 220 aa8.15□□□□□ -1.1
TM9SF3-203ENST00000464654 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
TM9SF3-203ENST00000464654 TRIM47Q96LD4 638 aa8.15□□□□□ -1.1
TM9SF3-203ENST00000464654 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
TM9SF3-203ENST00000464654 NR3C2P08235 984 aa8.14□□□□□ -1.11
TM9SF3-203ENST00000464654 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
TM9SF3-203ENST00000464654 ADAM32Q8TC27 787 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 254.9 ms