RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 COL14A1Q05707 1796 aaKnown RBP31.35■■■□□ 2.61
CPNE1-220ENST00000458038 BTG4Q9NY30 223 aa31.35■■■□□ 2.61
CPNE1-220ENST00000458038 PAK3O75914 559 aaPredicted RBP31.33■■■□□ 2.61
CPNE1-220ENST00000458038 NUDT16Q96DE0 195 aaKnown RBP31.33■■■□□ 2.61
CPNE1-220ENST00000458038 NRAPQ86VF7 1730 aa31.32■■■□□ 2.6
CPNE1-220ENST00000458038 KIAA1210Q9ULL0 1709 aa31.3■■■□□ 2.6
CPNE1-220ENST00000458038 ATP7BP35670 1465 aa31.29■■■□□ 2.6
CPNE1-220ENST00000458038 A0A0G2JS52 829 aa31.27■■■□□ 2.6
CPNE1-220ENST00000458038 MYT1Q01538 1121 aa31.27■■■□□ 2.6
CPNE1-220ENST00000458038 CDK19Q9BWU1 502 aa31.27■■■□□ 2.6
CPNE1-220ENST00000458038 CRYBG1Q9Y4K1 1723 aa31.27■■■□□ 2.6
CPNE1-220ENST00000458038 FAM98CQ17RN3 349 aaKnown RBP31.26■■■□□ 2.59
CPNE1-220ENST00000458038 PRDM11Q9NQV5 511 aa31.26■■■□□ 2.59
CPNE1-220ENST00000458038 CCDC61Q9Y6R9 512 aa31.25■■■□□ 2.59
CPNE1-220ENST00000458038 SPATA31A5Q5VU36 1347 aa31.24■■■□□ 2.59
CPNE1-220ENST00000458038 SPATA31A7Q8IWB4 1347 aa31.24■■■□□ 2.59
CPNE1-220ENST00000458038 DEFB132Q7Z7B7 95 aa31.24■■■□□ 2.59
CPNE1-220ENST00000458038 POLR3AO14802 1390 aaPredicted RBP31.22■■■□□ 2.59
CPNE1-220ENST00000458038 PLEKHG3A1L390 1219 aa31.21■■■□□ 2.59
CPNE1-220ENST00000458038 BAG6P46379 1132 aa31.19■■■□□ 2.58
CPNE1-220ENST00000458038 NBPF8Q3BBV2 869 aa31.19■■■□□ 2.58
CPNE1-220ENST00000458038 ACEP12821 1306 aa31.19■■■□□ 2.58
CPNE1-220ENST00000458038 TOPAZ1Q8N9V7 1692 aa31.17■■■□□ 2.58
CPNE1-220ENST00000458038 KIAA0232Q92628 1395 aa31.16■■■□□ 2.58
CPNE1-220ENST00000458038 NBPF1Q3BBV0 1214 aa31.14■■■□□ 2.58
CPNE1-220ENST00000458038 PHRF1Q9P1Y6 1649 aaKnown RBP31.13■■■□□ 2.57
CPNE1-220ENST00000458038 SPATA31A1Q5TZJ5 1347 aa31.13■■■□□ 2.57
CPNE1-220ENST00000458038 THSD7AQ9UPZ6 1657 aa31.12■■■□□ 2.57
CPNE1-220ENST00000458038 CENPJQ9HC77 1338 aaPredicted RBP31.1■■■□□ 2.57
CPNE1-220ENST00000458038 ZC3H6P61129 1189 aaKnown RBP31.1■■■□□ 2.57
CPNE1-220ENST00000458038 CHRNA2Q15822 529 aa31.1■■■□□ 2.57
CPNE1-220ENST00000458038 ABTB2Q8N961 1025 aa31.1■■■□□ 2.57
CPNE1-220ENST00000458038 RGPD1P0DJD0 1748 aa31.1■■■□□ 2.57
CPNE1-220ENST00000458038 BRD4O60885 1362 aaPredicted RBP31.09■■■□□ 2.57
CPNE1-220ENST00000458038 SRPK2P78362 688 aaKnown RBP31.09■■■□□ 2.57
CPNE1-220ENST00000458038 NUTM2GQ5VZR2 741 aa31.09■■■□□ 2.57
CPNE1-220ENST00000458038 EVA1CP58658 441 aa31.06■■■□□ 2.56
CPNE1-220ENST00000458038 NLRP13Q86W25 1043 aa31.06■■■□□ 2.56
CPNE1-220ENST00000458038 STRN4Q9NRL3 753 aa31.06■■■□□ 2.56
CPNE1-220ENST00000458038 CPDO75976 1380 aa31.05■■■□□ 2.56
CPNE1-220ENST00000458038 FAM196AQ6ZSG2 479 aa31.04■■■□□ 2.56
CPNE1-220ENST00000458038 PPIP5K1Q6PFW1 1433 aa31.04■■■□□ 2.56
CPNE1-220ENST00000458038 USP19O94966 1318 aa31.03■■■□□ 2.56
CPNE1-220ENST00000458038 BARGINQ6ZT62 677 aa31.03■■■□□ 2.56
CPNE1-220ENST00000458038 DISP2A7MBM2 1401 aa31.03■■■□□ 2.56
CPNE1-220ENST00000458038 FAM182BQ5T319 152 aa31.02■■■□□ 2.56
CPNE1-220ENST00000458038 SSH2Q76I76 1423 aa31■■■□□ 2.55
CPNE1-220ENST00000458038 EN1Q05925 392 aaPredicted RBP31■■■□□ 2.55
CPNE1-220ENST00000458038 NRKQ7Z2Y5 1582 aa31■■■□□ 2.55
CPNE1-220ENST00000458038 GCP02774 474 aa30.99■■■□□ 2.55
CPNE1-220ENST00000458038 CABP2Q9NPB3 220 aa30.99■■■□□ 2.55
CPNE1-220ENST00000458038 LRP5O75197 1615 aa30.98■■■□□ 2.55
CPNE1-220ENST00000458038 QRICH2Q9H0J4 1663 aa30.98■■■□□ 2.55
CPNE1-220ENST00000458038 CAMTA1Q9Y6Y1 1673 aa30.97■■■□□ 2.55
CPNE1-220ENST00000458038 L3MBTL2Q969R5 705 aa30.97■■■□□ 2.55
CPNE1-220ENST00000458038 THRAP3Q9Y2W1 955 aaKnown RBP30.97■■■□□ 2.55
CPNE1-220ENST00000458038 TCP11L2Q8N4U5 519 aa30.96■■■□□ 2.55
CPNE1-220ENST00000458038 USP35Q9P2H5 1018 aa30.96■■■□□ 2.55
CPNE1-220ENST00000458038 TNS1Q9HBL0 1735 aaKnown RBP30.95■■■□□ 2.55
CPNE1-220ENST00000458038 LMO7Q8WWI1 1683 aa30.95■■■□□ 2.55
CPNE1-220ENST00000458038 PDE3BQ13370 1112 aa30.95■■■□□ 2.55
CPNE1-220ENST00000458038 LARP1Q6PKG0 1096 aaKnown RBP30.93■■■□□ 2.54
CPNE1-220ENST00000458038 CABP1Q9NZU7 370 aa30.93■■■□□ 2.54
CPNE1-220ENST00000458038 EVC2Q86UK5 1308 aa30.93■■■□□ 2.54
CPNE1-220ENST00000458038 PSDA5PKW4 1024 aaPredicted RBP30.92■■■□□ 2.54
CPNE1-220ENST00000458038 TRIM37O94972 964 aa30.92■■■□□ 2.54
CPNE1-220ENST00000458038 PARD3Q8TEW0 1356 aa30.92■■■□□ 2.54
CPNE1-220ENST00000458038 USP6P35125 1406 aa30.91■■■□□ 2.54
CPNE1-220ENST00000458038 C11orf95C9JLR9 678 aaPredicted RBP30.91■■■□□ 2.54
CPNE1-220ENST00000458038 NLRP6P59044 892 aa30.89■■■□□ 2.54
CPNE1-220ENST00000458038 CAMKK2Q96RR4 588 aa30.89■■■□□ 2.54
CPNE1-220ENST00000458038 APBA3O96018 575 aa30.87■■■□□ 2.53
CPNE1-220ENST00000458038 EZH2Q15910 746 aaKnown RBP30.87■■■□□ 2.53
CPNE1-220ENST00000458038 ZNF692Q9BU19 519 aaPredicted RBP30.87■■■□□ 2.53
CPNE1-220ENST00000458038 TRPM1Q7Z4N2 1603 aa30.87■■■□□ 2.53
CPNE1-220ENST00000458038 AATKQ6ZMQ8 1374 aa30.86■■■□□ 2.53
CPNE1-220ENST00000458038 COL5A2P05997 1499 aaPredicted RBP30.86■■■□□ 2.53
CPNE1-220ENST00000458038 R3HDM1Q15032 1099 aaKnown RBP30.84■■■□□ 2.53
CPNE1-220ENST00000458038 CRB1P82279 1406 aa30.83■■■□□ 2.53
CPNE1-220ENST00000458038 ROCK2O75116 1388 aaKnown RBP30.83■■■□□ 2.53
CPNE1-220ENST00000458038 SLIT3O75094 1523 aa30.83■■■□□ 2.53
CPNE1-220ENST00000458038 PARP4Q9UKK3 1724 aaKnown RBP30.82■■■□□ 2.52
CPNE1-220ENST00000458038 SIN3AQ96ST3 1273 aa30.82■■■□□ 2.52
CPNE1-220ENST00000458038 NEUROD1Q13562 356 aa30.78■■■□□ 2.52
CPNE1-220ENST00000458038 KCNH5Q8NCM2 988 aa30.78■■■□□ 2.52
CPNE1-220ENST00000458038 ZBTB7CA1YPR0 619 aa30.77■■■□□ 2.52
CPNE1-220ENST00000458038 PIK3C2AO00443 1686 aa30.77■■■□□ 2.52
CPNE1-220ENST00000458038 TTC21AQ8NDW8 1320 aa30.76■■■□□ 2.52
CPNE1-220ENST00000458038 TTC21BQ7Z4L5 1316 aa30.75■■■□□ 2.51
CPNE1-220ENST00000458038 NBPF14Q5TI25 921 aa30.75■■■□□ 2.51
CPNE1-220ENST00000458038 AKAP12Q02952 1782 aa30.74■■■□□ 2.51
CPNE1-220ENST00000458038 TOM1L2Q6ZVM7 507 aa30.74■■■□□ 2.51
CPNE1-220ENST00000458038 RREB1Q92766 1687 aa30.74■■■□□ 2.51
CPNE1-220ENST00000458038 COL18A1P39060 1754 aa30.74■■■□□ 2.51
CPNE1-220ENST00000458038 CDCA7Q9BWT1 371 aaPredicted RBP30.73■■■□□ 2.51
CPNE1-220ENST00000458038 ARHGEF25Q86VW2 580 aa30.72■■■□□ 2.51
CPNE1-220ENST00000458038 OVOS2A0A0G2JMS6 1433 aa30.72■■■□□ 2.51
CPNE1-220ENST00000458038 OVOS2A0A0J9YW53 1432 aa30.72■■■□□ 2.51
CPNE1-220ENST00000458038 OVOS2Q6IE36 1432 aa30.72■■■□□ 2.51
CPNE1-220ENST00000458038 WDR17Q8IZU2 1322 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms