RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KMT5BQ4FZB7 885 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 HDGFL1Q5TGJ6 251 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 TMCO4Q5TGY1 634 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 NUTM2DQ5VT03 806 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 TRAF7Q6Q0C0 670 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 NUTM2AQ8IVF1 878 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 EMID1Q96A84 441 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 PBXIP1Q96AQ6 731 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 NDUFB9Q9Y6M9 179 aa5.13□□□□□ -1.59
HMGB3P8-201ENST00000449709 PPEF1O14829 653 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P8-201ENST00000449709 NEFLP07196 543 aa5.12□□□□□ -1.59
HMGB3P8-201ENST00000449709 CFAP70Q5T0N1 1121 aa5.12□□□□□ -1.59
HMGB3P8-201ENST00000449709 ZBTB3Q9H5J0 574 aa5.12□□□□□ -1.59
HMGB3P8-201ENST00000449709 PDZRN3Q9UPQ7 1066 aa5.12□□□□□ -1.59
HMGB3P8-201ENST00000449709 HOXA2O43364 376 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 GPR37L1O60883 481 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 S1PR4O95977 384 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 GCGRP47871 477 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 MFAP1P55081 439 aaKnown RBP5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 USP46P62068 366 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 WASHC4Q2M389 1173 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 TRIM34Q9BYJ4 488 aa5.11□□□□□ -1.59
HMGB3P8-201ENST00000449709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 PATL2C9JE40 543 aaKnown RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 C11orf95C9JLR9 678 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 FDX1P10109 184 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 DEKP35659 375 aaKnown RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 SLC19A1P41440 591 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 CTDSPL2Q05D32 466 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 PUS10Q3MIT2 529 aaKnown RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 TRIM67Q6ZTA4 783 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 RDH13Q8NBN7 331 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 HMX1Q9NP08 348 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 PCDHGC3Q9UN70 934 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 MTMR7Q9Y216 660 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 USTQ9Y2C2 406 aa5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 RBM19Q9Y4C8 960 aaKnown RBP5.1□□□□□ -1.59
HMGB3P8-201ENST00000449709 BRD1O95696 1058 aa5.09□□□□□ -1.59
HMGB3P8-201ENST00000449709 RFX1P22670 979 aa5.09□□□□□ -1.59
HMGB3P8-201ENST00000449709 KCNA1Q09470 495 aa5.09□□□□□ -1.59
HMGB3P8-201ENST00000449709 PPP1R12CQ9BZL4 782 aa5.09□□□□□ -1.59
HMGB3P8-201ENST00000449709 ALG2Q9H553 416 aa5.09□□□□□ -1.59
HMGB3P8-201ENST00000449709 NR1I2O75469 434 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 ADH1BP00325 375 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 FGD1P98174 961 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 VAC14Q08AM6 782 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 LIAT1Q6ZQX7 453 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 SCUBE3Q8IX30 993 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 ANKLE1Q8NAG6 615 aa5.08□□□□□ -1.6
HMGB3P8-201ENST00000449709 CSB-PGBD3P0DP91 1061 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 GUCA2AQ02747 115 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 MTMR2Q13614 643 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 PLA2G2CQ5R387 149 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 RSPH4AQ5TD94 716 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 SPRYD7Q5W111 196 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 LRRN4Q8WUT4 740 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 HLA-CQ95604 372 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 SLC6A16Q9GZN6 736 aa5.07□□□□□ -1.6
HMGB3P8-201ENST00000449709 PALM3A6NDB9 673 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P8-201ENST00000449709 HELBQ8NG08 1087 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P8-201ENST00000449709 UCN2Q96RP3 112 aa5.06□□□□□ -1.6
HMGB3P8-201ENST00000449709 CARNS1A5YM72 827 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 CFAP99D6REC4 459 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 SOX11P35716 441 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 AAMPQ13685 434 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 ZNF697Q5TEC3 545 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 FOXD4L5Q5VV16 416 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 ZNF598Q86UK7 904 aaKnown RBP5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 EPS8L1Q8TE68 723 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 CCDC136Q96JN2 1154 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 SPSB2Q99619 263 aa5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 TFIP11Q9UBB9 837 aaKnown RBP5.05□□□□□ -1.6
HMGB3P8-201ENST00000449709 TNFRSF10AO00220 468 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 ATG7O95352 703 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 LMOD1P29536 600 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 FUT2Q10981 343 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 MORN1Q5T089 497 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 ZNF787Q6DD87 383 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 PRR7Q8TB68 274 aa5.04□□□□□ -1.6
HMGB3P8-201ENST00000449709 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
HMGB3P8-201ENST00000449709 GDF9O60383 454 aa5.03□□□□□ -1.6
HMGB3P8-201ENST00000449709 THAP11Q96EK4 314 aa5.03□□□□□ -1.6
HMGB3P8-201ENST00000449709 SLC27A5Q9Y2P5 690 aa5.03□□□□□ -1.6
HMGB3P8-201ENST00000449709 WASHC2CQ9Y4E1 1318 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 C6orf229H3BNL8 230 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 ATP6V1AP38606 617 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRR20EP86478 221 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRR20CP86479 221 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRR20DP86480 221 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRR20BP86481 221 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PRR20AP86496 221 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 GRIPAP1Q4V328 841 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 PKDCCQ504Y2 493 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 FAM160A2Q8N612 972 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 TSC1Q92574 1164 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 ZNF428Q96B54 188 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 VRTNQ9H8Y1 702 aa5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 MAFBQ9Y5Q3 323 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P8-201ENST00000449709 WASHC2AQ641Q2 1341 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms