RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 FOXC1Q12948 553 aa9.74□□□□□ -0.85
AC003001.1-201ENST00000443247 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
AC003001.1-201ENST00000443247 EVA1BQ9NVM1 165 aa9.74□□□□□ -0.85
AC003001.1-201ENST00000443247 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
AC003001.1-201ENST00000443247 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
AC003001.1-201ENST00000443247 MAP10Q9P2G4 905 aa9.73□□□□□ -0.85
AC003001.1-201ENST00000443247 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
AC003001.1-201ENST00000443247 UNC93B1Q9H1C4 597 aa9.71□□□□□ -0.86
AC003001.1-201ENST00000443247 WNT7AO00755 349 aa9.7□□□□□ -0.86
AC003001.1-201ENST00000443247 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
AC003001.1-201ENST00000443247 LRRN4Q8WUT4 740 aa9.7□□□□□ -0.86
AC003001.1-201ENST00000443247 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
AC003001.1-201ENST00000443247 WNT7BP56706 349 aa9.68□□□□□ -0.86
AC003001.1-201ENST00000443247 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
AC003001.1-201ENST00000443247 AAASQ9NRG9 546 aa9.68□□□□□ -0.86
AC003001.1-201ENST00000443247 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
AC003001.1-201ENST00000443247 CYP4X1Q8N118 509 aa9.67□□□□□ -0.86
AC003001.1-201ENST00000443247 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
AC003001.1-201ENST00000443247 SKOR1P84550 965 aa9.66□□□□□ -0.86
AC003001.1-201ENST00000443247 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
AC003001.1-201ENST00000443247 RC3H1Q5TC82 1133 aaKnown RBP9.65□□□□□ -0.86
AC003001.1-201ENST00000443247 BAP1Q92560 729 aa9.65□□□□□ -0.86
AC003001.1-201ENST00000443247 MRGPRX2Q96LB1 330 aa9.65□□□□□ -0.86
AC003001.1-201ENST00000443247 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
AC003001.1-201ENST00000443247 TTC24A2A3L6 582 aaPredicted RBP9.63□□□□□ -0.87
AC003001.1-201ENST00000443247 NR6A1Q15406 480 aa9.63□□□□□ -0.87
AC003001.1-201ENST00000443247 CRIPAKQ8N1N5 446 aa9.63□□□□□ -0.87
AC003001.1-201ENST00000443247 ZNF511Q8NB15 262 aa9.63□□□□□ -0.87
AC003001.1-201ENST00000443247 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
AC003001.1-201ENST00000443247 AVPP01185 164 aa9.62□□□□□ -0.87
AC003001.1-201ENST00000443247 SH3BP2P78314 561 aa9.62□□□□□ -0.87
AC003001.1-201ENST00000443247 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
AC003001.1-201ENST00000443247 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
AC003001.1-201ENST00000443247 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
AC003001.1-201ENST00000443247 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
AC003001.1-201ENST00000443247 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
AC003001.1-201ENST00000443247 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
AC003001.1-201ENST00000443247 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
AC003001.1-201ENST00000443247 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
AC003001.1-201ENST00000443247 TRIM34Q9BYJ4 488 aa9.58□□□□□ -0.88
AC003001.1-201ENST00000443247 FKBPLQ9UIM3 349 aa9.58□□□□□ -0.88
AC003001.1-201ENST00000443247 SMPD1P17405 629 aa9.57□□□□□ -0.88
AC003001.1-201ENST00000443247 AGERQ15109 404 aa9.57□□□□□ -0.88
AC003001.1-201ENST00000443247 MTMR14Q8NCE2 650 aa9.57□□□□□ -0.88
AC003001.1-201ENST00000443247 FOXJ1Q92949 421 aa9.57□□□□□ -0.88
AC003001.1-201ENST00000443247 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
AC003001.1-201ENST00000443247 J3QL48 77 aa9.56□□□□□ -0.88
AC003001.1-201ENST00000443247 SIAH2O43255 324 aa9.56□□□□□ -0.88
AC003001.1-201ENST00000443247 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
AC003001.1-201ENST00000443247 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
AC003001.1-201ENST00000443247 AXIN1O15169 862 aa9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 VARSP26640 1264 aaKnown RBP9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 CTC1Q2NKJ3 1217 aa9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 SH3BP5LQ7L8J4 393 aa9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
AC003001.1-201ENST00000443247 MAGEB6P1A0A0J9YX57 407 aa9.53□□□□□ -0.88
AC003001.1-201ENST00000443247 ALDH1A1P00352 501 aa9.53□□□□□ -0.88
AC003001.1-201ENST00000443247 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
AC003001.1-201ENST00000443247 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
AC003001.1-201ENST00000443247 APBB1O00213 710 aa9.52□□□□□ -0.89
AC003001.1-201ENST00000443247 SOCS7O14512 581 aa9.52□□□□□ -0.89
AC003001.1-201ENST00000443247 PDXDC2PQ6P474 469 aa9.52□□□□□ -0.89
AC003001.1-201ENST00000443247 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
AC003001.1-201ENST00000443247 MCM6Q14566 821 aa9.51□□□□□ -0.89
AC003001.1-201ENST00000443247 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
AC003001.1-201ENST00000443247 MPNDQ8N594 471 aa9.5□□□□□ -0.89
AC003001.1-201ENST00000443247 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
AC003001.1-201ENST00000443247 HPS1Q92902 700 aa9.5□□□□□ -0.89
AC003001.1-201ENST00000443247 ARHGAP9Q9BRR9 750 aa9.5□□□□□ -0.89
AC003001.1-201ENST00000443247 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
AC003001.1-201ENST00000443247 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
AC003001.1-201ENST00000443247 C11orf95C9JLR9 678 aaPredicted RBP9.48□□□□□ -0.89
AC003001.1-201ENST00000443247 PTK2Q05397 1052 aa9.48□□□□□ -0.89
AC003001.1-201ENST00000443247 C1QTNF2Q9BXJ5 285 aa9.48□□□□□ -0.89
AC003001.1-201ENST00000443247 GPR37L1O60883 481 aa9.47□□□□□ -0.89
AC003001.1-201ENST00000443247 ARID5BQ14865 1188 aa9.47□□□□□ -0.89
AC003001.1-201ENST00000443247 OCSTAMPQ9BR26 566 aa9.47□□□□□ -0.89
AC003001.1-201ENST00000443247 TBC1D2BQ9UPU7 963 aa9.47□□□□□ -0.89
AC003001.1-201ENST00000443247 GPSM3Q9Y4H4 160 aa9.47□□□□□ -0.89
AC003001.1-201ENST00000443247 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
AC003001.1-201ENST00000443247 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
AC003001.1-201ENST00000443247 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
AC003001.1-201ENST00000443247 NFX1Q12986 1120 aaKnown RBP9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 CDK15Q96Q40 435 aa9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 PRM3Q9NNZ6 103 aa9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 ATP13A2Q9NQ11 1180 aa9.44□□□□□ -0.9
AC003001.1-201ENST00000443247 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 WFS1O76024 890 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 ADH1CP00326 375 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 FLIIQ13045 1269 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 GDPD2Q9HCC8 539 aa9.43□□□□□ -0.9
AC003001.1-201ENST00000443247 SNRPBP14678 240 aaKnown RBP9.41□□□□□ -0.9
AC003001.1-201ENST00000443247 ABL2P42684 1182 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms