RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 TMEM134Q9H6X4 195 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 PCDHGA4Q9Y5G9 962 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 GALR2O43603 387 aaPredicted RBP7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 ANAPC15P60006 121 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 NR6A1Q15406 480 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 CNPY4Q8N129 248 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 ZNF454Q8N9F8 522 aa7.94□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 UNC13AQ9UPW8 1703 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 WIZO95785 1651 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 NUDT18Q6ZVK8 323 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 NFATC2IPQ8NCF5 419 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 FAM198AQ9UFP1 575 aa7.93□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L15C9J2P7 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L10C9JJH3 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L13C9JLJ4 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L11C9JVI0 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L21D6R901 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L18D6R9N7 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L22D6RA61 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L17D6RBQ6 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L19D6RCP7 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L20D6RJB6 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 PIK3CDO00329 1044 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 MAFGO15525 162 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 GUCA2AQ02747 115 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L24Q0WX57 530 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 SLAIN2Q9P270 581 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 CADPSQ9ULU8 1353 aa7.92□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 SKIP12755 728 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 GCGRP47871 477 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 CRTC2Q53ET0 693 aaPredicted RBP7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 LARP1Q6PKG0 1096 aaKnown RBP7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 USP17L5A8MUK1 530 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 NOL8Q76FK4 1167 aaKnown RBP7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 ANKRD13AQ8IZ07 590 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 ADAM33Q9BZ11 813 aa7.91□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 EXOC8Q8IYI6 725 aa7.9□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
ALMS1-IT1-201ENST00000441587 RASA1P20936 1047 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 FAM69CQ0P6D2 419 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 NR1H3Q13133 447 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ERICH6BQ5W0A0 696 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 HLA-CQ95604 372 aa7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 NBPF26B4DH59 902 aa7.89□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 KDM4FA0A1W2PPD8 638 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 RECKO95980 971 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 RBM10P98175 930 aaKnown RBP7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 PTK7Q13308 1070 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 PNMA3Q9UL41 463 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 LOC102724159A0A0B4J2E5 919 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ATMINO43313 823 aaPredicted RBP7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 PWP2Q15269 919 aaKnown RBP7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 GPATCH11Q8N954 259 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 TSKSQ9UJT2 592 aa7.88□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 PLEKHD1A6NEE1 506 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 C19orf67A6NJJ6 358 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 MCCP23508 829 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 C3orf67Q6ZVT6 689 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 SMARCA4P51532 1647 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ATP5J2-PTCD1G3V325 749 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 SEC24BO95487 1268 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 TAGLNQ01995 201 aaKnown RBP7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 FBXO33Q7Z6M2 555 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 TATDN2Q93075 761 aa7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 DNAJC2Q99543 621 aaKnown RBP7.87□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ABL1P00519 1130 aa7.86□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ERCC5P28715 1186 aaPredicted RBP7.86□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 SCNN1AP37088 669 aa7.86□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ANKMY2Q8IV38 441 aa7.86□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 FBXO45P0C2W1 286 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ASTLQ6HA08 431 aaPredicted RBP7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 RIPOR2Q9Y4F9 1068 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ANKRD62A6NC57 917 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 ZBBXA8MT70 800 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 GLIPR1L2Q4G1C9 344 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 DIEXFQ68CQ4 756 aaKnown RBP7.85□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 PER1O15534 1290 aaPredicted RBP7.84□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 C7P10643 843 aa7.84□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 MAPK1P28482 360 aa7.84□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.15
ALMS1-IT1-201ENST00000441587 H3BRB1 525 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms