RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
CSTF1-203ENST00000428552 PRR36Q9H6K5 1346 aa12.14□□□□□ -0.47
CSTF1-203ENST00000428552 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
CSTF1-203ENST00000428552 CFAP70Q5T0N1 1121 aa12.14□□□□□ -0.47
CSTF1-203ENST00000428552 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
CSTF1-203ENST00000428552 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
CSTF1-203ENST00000428552 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
CSTF1-203ENST00000428552 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
CSTF1-203ENST00000428552 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
CSTF1-203ENST00000428552 DHX57Q6P158 1386 aaKnown RBP12.11□□□□□ -0.47
CSTF1-203ENST00000428552 TRIM37O94972 964 aa12.11□□□□□ -0.47
CSTF1-203ENST00000428552 MPHOSPH9Q99550 1183 aa12.1□□□□□ -0.47
CSTF1-203ENST00000428552 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
CSTF1-203ENST00000428552 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
CSTF1-203ENST00000428552 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
CSTF1-203ENST00000428552 YY1P25490 414 aa12.09□□□□□ -0.47
CSTF1-203ENST00000428552 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
CSTF1-203ENST00000428552 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
CSTF1-203ENST00000428552 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
CSTF1-203ENST00000428552 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
CSTF1-203ENST00000428552 APBA3O96018 575 aa12.07□□□□□ -0.48
CSTF1-203ENST00000428552 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
CSTF1-203ENST00000428552 CHRNA2Q15822 529 aa12.06□□□□□ -0.48
CSTF1-203ENST00000428552 POGKQ9P215 609 aa12.05□□□□□ -0.48
CSTF1-203ENST00000428552 ATP7BP35670 1465 aa12.05□□□□□ -0.48
CSTF1-203ENST00000428552 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
CSTF1-203ENST00000428552 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
CSTF1-203ENST00000428552 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
CSTF1-203ENST00000428552 SSH2Q76I76 1423 aa12.04□□□□□ -0.48
CSTF1-203ENST00000428552 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
CSTF1-203ENST00000428552 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
CSTF1-203ENST00000428552 TRAK1Q9UPV9 953 aa12.04□□□□□ -0.48
CSTF1-203ENST00000428552 NRKQ7Z2Y5 1582 aa12.04□□□□□ -0.48
CSTF1-203ENST00000428552 PEAK1Q9H792 1746 aa12.03□□□□□ -0.48
CSTF1-203ENST00000428552 STRN4Q9NRL3 753 aa12.03□□□□□ -0.48
CSTF1-203ENST00000428552 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
CSTF1-203ENST00000428552 CASZ1Q86V15 1759 aa12.02□□□□□ -0.48
CSTF1-203ENST00000428552 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
CSTF1-203ENST00000428552 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
CSTF1-203ENST00000428552 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
CSTF1-203ENST00000428552 NINLQ9Y2I6 1382 aa12.02□□□□□ -0.49
CSTF1-203ENST00000428552 UTRNP46939 3433 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 PARP4Q9UKK3 1724 aaKnown RBP12.01□□□□□ -0.49
CSTF1-203ENST00000428552 KCNQ2O43526 872 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 LARP1Q6PKG0 1096 aaKnown RBP12.01□□□□□ -0.49
CSTF1-203ENST00000428552 SPON1Q9HCB6 807 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
CSTF1-203ENST00000428552 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
CSTF1-203ENST00000428552 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
CSTF1-203ENST00000428552 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
CSTF1-203ENST00000428552 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
CSTF1-203ENST00000428552 POLR3AO14802 1390 aaPredicted RBP12□□□□□ -0.49
CSTF1-203ENST00000428552 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
CSTF1-203ENST00000428552 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
CSTF1-203ENST00000428552 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
CSTF1-203ENST00000428552 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
CSTF1-203ENST00000428552 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
CSTF1-203ENST00000428552 CPDO75976 1380 aa11.99□□□□□ -0.49
CSTF1-203ENST00000428552 USP19O94966 1318 aa11.98□□□□□ -0.49
CSTF1-203ENST00000428552 TCP11L2Q8N4U5 519 aa11.98□□□□□ -0.49
CSTF1-203ENST00000428552 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
CSTF1-203ENST00000428552 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
CSTF1-203ENST00000428552 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
CSTF1-203ENST00000428552 COL5A2P05997 1499 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-203ENST00000428552 PTF1AQ7RTS3 328 aa11.97□□□□□ -0.49
CSTF1-203ENST00000428552 MYOM1P52179 1685 aa11.97□□□□□ -0.49
CSTF1-203ENST00000428552 ACEP12821 1306 aa11.96□□□□□ -0.49
CSTF1-203ENST00000428552 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-203ENST00000428552 PTGER2P43116 358 aa11.95□□□□□ -0.5
CSTF1-203ENST00000428552 EVA1CP58658 441 aa11.95□□□□□ -0.5
CSTF1-203ENST00000428552 PROM2Q8N271 834 aa11.95□□□□□ -0.5
CSTF1-203ENST00000428552 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
CSTF1-203ENST00000428552 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
CSTF1-203ENST00000428552 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
CSTF1-203ENST00000428552 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
CSTF1-203ENST00000428552 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
CSTF1-203ENST00000428552 PLSCR1O15162 318 aa11.94□□□□□ -0.5
CSTF1-203ENST00000428552 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
CSTF1-203ENST00000428552 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
CSTF1-203ENST00000428552 CRB1P82279 1406 aa11.93□□□□□ -0.5
CSTF1-203ENST00000428552 GCP02774 474 aa11.92□□□□□ -0.5
CSTF1-203ENST00000428552 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
CSTF1-203ENST00000428552 WNK3Q9BYP7 1800 aa11.92□□□□□ -0.5
CSTF1-203ENST00000428552 COL18A1P39060 1754 aa11.92□□□□□ -0.5
CSTF1-203ENST00000428552 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 BCL9O00512 1426 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 SLIT3O75094 1523 aa11.91□□□□□ -0.5
CSTF1-203ENST00000428552 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
CSTF1-203ENST00000428552 BCL11BQ9C0K0 894 aaPredicted RBP11.9□□□□□ -0.5
CSTF1-203ENST00000428552 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-203ENST00000428552 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-203ENST00000428552 AATKQ6ZMQ8 1374 aa11.89□□□□□ -0.51
CSTF1-203ENST00000428552 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
CSTF1-203ENST00000428552 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
CSTF1-203ENST00000428552 FHDC1Q9C0D6 1143 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms