RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
LINC01953-201ENST00000426870 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
LINC01953-201ENST00000426870 BAP1Q92560 729 aa12.31□□□□□ -0.44
LINC01953-201ENST00000426870 MAP10Q9P2G4 905 aa12.31□□□□□ -0.44
LINC01953-201ENST00000426870 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
LINC01953-201ENST00000426870 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
LINC01953-201ENST00000426870 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
LINC01953-201ENST00000426870 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
LINC01953-201ENST00000426870 RFC5P40937 340 aa12.29□□□□□ -0.44
LINC01953-201ENST00000426870 DGAT1O75907 488 aa12.28□□□□□ -0.44
LINC01953-201ENST00000426870 SKOR1P84550 965 aa12.28□□□□□ -0.44
LINC01953-201ENST00000426870 TMEM259Q4ZIN3 620 aa12.28□□□□□ -0.44
LINC01953-201ENST00000426870 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
LINC01953-201ENST00000426870 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
LINC01953-201ENST00000426870 SH3BP2P78314 561 aa12.27□□□□□ -0.45
LINC01953-201ENST00000426870 AGERQ15109 404 aa12.27□□□□□ -0.45
LINC01953-201ENST00000426870 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
LINC01953-201ENST00000426870 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
LINC01953-201ENST00000426870 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
LINC01953-201ENST00000426870 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
LINC01953-201ENST00000426870 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
LINC01953-201ENST00000426870 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
LINC01953-201ENST00000426870 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
LINC01953-201ENST00000426870 VARSP26640 1264 aaKnown RBP12.23□□□□□ -0.45
LINC01953-201ENST00000426870 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
LINC01953-201ENST00000426870 BPHLQ86WA6 291 aaPredicted RBP12.22□□□□□ -0.45
LINC01953-201ENST00000426870 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.45
LINC01953-201ENST00000426870 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
LINC01953-201ENST00000426870 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
LINC01953-201ENST00000426870 NR6A1Q15406 480 aa12.18□□□□□ -0.46
LINC01953-201ENST00000426870 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
LINC01953-201ENST00000426870 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
LINC01953-201ENST00000426870 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
LINC01953-201ENST00000426870 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
LINC01953-201ENST00000426870 J3QL48 77 aa12.15□□□□□ -0.46
LINC01953-201ENST00000426870 APBB1O00213 710 aa12.15□□□□□ -0.46
LINC01953-201ENST00000426870 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
LINC01953-201ENST00000426870 SIAH2O43255 324 aa12.14□□□□□ -0.47
LINC01953-201ENST00000426870 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
LINC01953-201ENST00000426870 SMPD1P17405 629 aa12.13□□□□□ -0.47
LINC01953-201ENST00000426870 MYT1Q01538 1121 aa12.13□□□□□ -0.47
LINC01953-201ENST00000426870 CTC1Q2NKJ3 1217 aa12.13□□□□□ -0.47
LINC01953-201ENST00000426870 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
LINC01953-201ENST00000426870 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
LINC01953-201ENST00000426870 MPNDQ8N594 471 aa12.12□□□□□ -0.47
LINC01953-201ENST00000426870 AVPP01185 164 aa12.11□□□□□ -0.47
LINC01953-201ENST00000426870 PTK2Q05397 1052 aa12.11□□□□□ -0.47
LINC01953-201ENST00000426870 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
LINC01953-201ENST00000426870 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
LINC01953-201ENST00000426870 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
LINC01953-201ENST00000426870 AXIN1O15169 862 aa12.1□□□□□ -0.47
LINC01953-201ENST00000426870 SH3BP5LQ7L8J4 393 aa12.1□□□□□ -0.47
LINC01953-201ENST00000426870 ZBTB33Q86T24 672 aa12.1□□□□□ -0.47
LINC01953-201ENST00000426870 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
LINC01953-201ENST00000426870 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
LINC01953-201ENST00000426870 GPSM3Q9Y4H4 160 aa12.08□□□□□ -0.48
LINC01953-201ENST00000426870 CRIPAKQ8N1N5 446 aa12.07□□□□□ -0.48
LINC01953-201ENST00000426870 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
LINC01953-201ENST00000426870 PRM3Q9NNZ6 103 aa12.07□□□□□ -0.48
LINC01953-201ENST00000426870 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
LINC01953-201ENST00000426870 HPS1Q92902 700 aa12.06□□□□□ -0.48
LINC01953-201ENST00000426870 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
LINC01953-201ENST00000426870 ADH1CP00326 375 aa12.05□□□□□ -0.48
LINC01953-201ENST00000426870 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
LINC01953-201ENST00000426870 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
LINC01953-201ENST00000426870 SOCS7O14512 581 aa12.04□□□□□ -0.48
LINC01953-201ENST00000426870 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
LINC01953-201ENST00000426870 NNTQ13423 1086 aa12.04□□□□□ -0.48
LINC01953-201ENST00000426870 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
LINC01953-201ENST00000426870 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
LINC01953-201ENST00000426870 C1QTNF2Q9BXJ5 285 aa12.04□□□□□ -0.48
LINC01953-201ENST00000426870 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
LINC01953-201ENST00000426870 LCE2BO14633 110 aa12.03□□□□□ -0.48
LINC01953-201ENST00000426870 NR5A1Q13285 461 aa12.03□□□□□ -0.48
LINC01953-201ENST00000426870 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
LINC01953-201ENST00000426870 TRIM34Q9BYJ4 488 aa12.03□□□□□ -0.48
LINC01953-201ENST00000426870 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
LINC01953-201ENST00000426870 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
LINC01953-201ENST00000426870 NDUFB9Q9Y6M9 179 aa12.02□□□□□ -0.49
LINC01953-201ENST00000426870 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
LINC01953-201ENST00000426870 SNRKQ9NRH2 765 aa12□□□□□ -0.49
LINC01953-201ENST00000426870 CAPN5O15484 640 aaPredicted RBP11.99□□□□□ -0.49
LINC01953-201ENST00000426870 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
LINC01953-201ENST00000426870 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
LINC01953-201ENST00000426870 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
LINC01953-201ENST00000426870 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
LINC01953-201ENST00000426870 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
LINC01953-201ENST00000426870 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
LINC01953-201ENST00000426870 ZBBXA8MT70 800 aa11.97□□□□□ -0.49
LINC01953-201ENST00000426870 FSHRP23945 695 aa11.97□□□□□ -0.49
LINC01953-201ENST00000426870 WDR4P57081 412 aaKnown RBP11.97□□□□□ -0.49
LINC01953-201ENST00000426870 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
LINC01953-201ENST00000426870 ZNF592Q92610 1267 aa11.96□□□□□ -0.49
LINC01953-201ENST00000426870 GRM5P41594 1212 aa11.95□□□□□ -0.5
LINC01953-201ENST00000426870 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
LINC01953-201ENST00000426870 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
LINC01953-201ENST00000426870 CCDC116Q8IYX3 515 aa11.93□□□□□ -0.5
LINC01953-201ENST00000426870 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
LINC01953-201ENST00000426870 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
LINC01953-201ENST00000426870 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms