RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CAPN10Q9HC96 672 aa7.9□□□□□ -1.14
CBX1P3-201ENST00000413296 PITPNM1O00562 1244 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 CREB3O43889 395 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 ATP2B4P23634 1241 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 ZSCAN29Q8IWY8 852 aaPredicted RBP7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 PMM1Q92871 262 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 UPF1Q92900 1129 aaKnown RBP eCLIP7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 SGSM3Q96HU1 749 aa7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 HMX1Q9NP08 348 aaPredicted RBP7.89□□□□□ -1.15
CBX1P3-201ENST00000413296 U2SURPO15042 1029 aaKnown RBP7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 GJA5P36382 358 aa7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 FOXD4L6Q3SYB3 417 aaPredicted RBP7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 FOXD4L3Q6VB84 417 aaPredicted RBP7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 GPATCH11Q8N954 259 aa7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 PXYLP1Q8TE99 480 aa7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 NAP1L5Q96NT1 182 aaPredicted RBP7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 TGIF2Q9GZN2 237 aa7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 CCSER2Q9H7U1 834 aa7.88□□□□□ -1.15
CBX1P3-201ENST00000413296 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 MAP3K13O43283 966 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 HSD3B2P26439 372 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 FAM69CQ0P6D2 419 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 SOGA3Q5TF21 947 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 METTL16Q86W50 562 aaKnown RBP7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 NUTM1Q86Y26 1132 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 CCAR1Q8IX12 1150 aaKnown RBP7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 TMTC2Q8N394 836 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 PCDHB15Q9Y5E8 787 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 COL4A3BPQ9Y5P4 624 aa7.87□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L21D6R901 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 RBL2Q08999 1139 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 GNL2Q13823 731 aaKnown RBP7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 CABLES1Q8TDN4 633 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 PKNOX2Q96KN3 472 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 EGFL7Q9UHF1 273 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 DCTN4Q9UJW0 460 aa7.86□□□□□ -1.15
CBX1P3-201ENST00000413296 H3BRB1 525 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 PPFIA4O75335 1185 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 ABL1P00519 1130 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 SCNN1AP37088 669 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 PLEKHG6Q3KR16 790 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 LDLRAD1Q5T700 205 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 PRPF38BQ5VTL8 546 aaKnown RBP7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 JAZF1Q86VZ6 243 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 CCDC146Q8IYE0 955 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 GMLQ99445 158 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 TUT1Q9H6E5 874 aaKnown RBP7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 GABBR1Q9UBS5 961 aa7.85□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L3A6NCW0 530 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L4A6NCW7 530 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 SH3BP5O60239 455 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 NDUFV2P19404 249 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 EIF4G2P78344 907 aaKnown RBP eCLIP7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 EN1Q05925 392 aaPredicted RBP7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 LONRF3Q496Y0 759 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 USP17L1Q7RTZ2 530 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 GLYCTKQ8IVS8 523 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 NME8Q8N427 588 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 EVI5LQ96CN4 794 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 PCDH12Q9NPG4 1184 aa7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 DMGDHQ9UI17 866 aaKnown RBP7.84□□□□□ -1.15
CBX1P3-201ENST00000413296 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
CBX1P3-201ENST00000413296 PPP1R18Q6NYC8 613 aa7.83□□□□□ -1.16
CBX1P3-201ENST00000413296 RNF34Q969K3 372 aa7.83□□□□□ -1.16
CBX1P3-201ENST00000413296 PPP1R3GB7ZBB8 358 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 MAP3K7O43318 606 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 EVI5O60447 810 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 ICMTO60725 284 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 ZNF211Q13398 564 aaPredicted RBP7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 BMS1Q14692 1282 aaKnown RBP7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 LARP1Q6PKG0 1096 aaKnown RBP7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 FILIP1Q7Z7B0 1213 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 METTL5Q9NRN9 209 aaKnown RBP7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 IFT57Q9NWB7 429 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 ADGRG1Q9Y653 693 aa7.82□□□□□ -1.16
CBX1P3-201ENST00000413296 S100BP04271 92 aaPredicted RBP7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 CD46P15529 392 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms