RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 ADAMTS2O95450 1211 aa4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 LYPD4Q6UWN0 246 aa4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 SULF1Q8IWU6 871 aa4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 DAXXQ9UER7 740 aaPredicted RBP4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 CNTNAP5Q8WYK1 1306 aa4.4□□□□□ -1.71
RNU6-554P-201ENST00000410466 SH3BP2P78314 561 aa4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 PTSQ03393 145 aa4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 METTL3Q86U44 580 aaKnown RBP4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 LINC00528Q8N1L1 170 aa4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 GOLGA2P5Q9HBQ8 144 aa4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 SOS2Q07890 1332 aaPredicted RBP4.39□□□□□ -1.71
RNU6-554P-201ENST00000410466 NUTM2FA1L443 756 aa4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 CDC14CA4D256 554 aa4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 ZIC2O95409 532 aaPredicted RBP4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 CELA2BP08218 269 aaPredicted RBP4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 MPNDQ8N594 471 aa4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 KLF16Q9BXK1 252 aaPredicted RBP4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 ZFAND3Q9H8U3 227 aa4.38□□□□□ -1.71
RNU6-554P-201ENST00000410466 ZMYM1Q5SVZ6 1142 aa4.37□□□□□ -1.71
RNU6-554P-201ENST00000410466 SV2AQ7L0J3 742 aa4.37□□□□□ -1.71
RNU6-554P-201ENST00000410466 CCDC155Q8N6L0 562 aa4.37□□□□□ -1.71
RNU6-554P-201ENST00000410466 FCHSD2O94868 740 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 JUNDP17535 347 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 VARSP26640 1264 aaKnown RBP4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 SRSF11Q05519 484 aaKnown RBP4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 VWA5B2Q8N398 1253 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 NEDD1Q8NHV4 660 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 NUDT12Q9BQG2 462 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 WDR70Q9NW82 654 aa4.36□□□□□ -1.71
RNU6-554P-201ENST00000410466 SCO2A0A1W2PP80 73 aa4.35□□□□□ -1.71
RNU6-554P-201ENST00000410466 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
RNU6-554P-201ENST00000410466 PTCRAQ6ISU1 281 aaPredicted RBP4.35□□□□□ -1.71
RNU6-554P-201ENST00000410466 MEIOBQ8N635 442 aa4.35□□□□□ -1.71
RNU6-554P-201ENST00000410466 ITPKCQ96DU7 683 aa4.35□□□□□ -1.71
RNU6-554P-201ENST00000410466 TTLL8A6PVC2 850 aa4.34□□□□□ -1.71
RNU6-554P-201ENST00000410466 ITGA6P23229 1130 aa4.34□□□□□ -1.71
RNU6-554P-201ENST00000410466 LINC01559Q495D7 138 aa4.34□□□□□ -1.71
RNU6-554P-201ENST00000410466 KRBA1A5PL33 1030 aa4.33□□□□□ -1.72
RNU6-554P-201ENST00000410466 MLLT3P42568 568 aaPredicted RBP4.33□□□□□ -1.72
RNU6-554P-201ENST00000410466 SH3RF1Q7Z6J0 888 aa4.33□□□□□ -1.72
RNU6-554P-201ENST00000410466 ALYREFQ86V81 257 aaKnown RBP4.32□□□□□ -1.72
RNU6-554P-201ENST00000410466 TSEN34Q9BSV6 310 aaKnown RBP4.32□□□□□ -1.72
RNU6-554P-201ENST00000410466 SLC35F4A4IF30 521 aa4.31□□□□□ -1.72
RNU6-554P-201ENST00000410466 FIGNL2A6NMB9 653 aa4.31□□□□□ -1.72
RNU6-554P-201ENST00000410466 COBLO75128 1261 aa4.31□□□□□ -1.72
RNU6-554P-201ENST00000410466 ZNF511Q8NB15 262 aa4.31□□□□□ -1.72
RNU6-554P-201ENST00000410466 FAM174AQ8TBP5 190 aa4.31□□□□□ -1.72
RNU6-554P-201ENST00000410466 SPTLC1O15269 473 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 CCNYL3P0C7X3 344 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 NR5A1Q13285 461 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 ARID5BQ14865 1188 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 NLRP7Q8WX94 980 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 BAP1Q92560 729 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 UNC93B1Q9H1C4 597 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 SEMA6BQ9H3T3 888 aa4.3□□□□□ -1.72
RNU6-554P-201ENST00000410466 NR3C2P08235 984 aa4.29□□□□□ -1.72
RNU6-554P-201ENST00000410466 BCRP11274 1271 aa4.29□□□□□ -1.72
RNU6-554P-201ENST00000410466 ITGB7P26010 798 aa4.29□□□□□ -1.72
RNU6-554P-201ENST00000410466 NBPF11Q86T75 865 aa4.29□□□□□ -1.72
RNU6-554P-201ENST00000410466 KDM4AO75164 1064 aa4.28□□□□□ -1.72
RNU6-554P-201ENST00000410466 DCAF8L2P0C7V8 631 aa4.28□□□□□ -1.72
RNU6-554P-201ENST00000410466 GAS6Q14393 721 aa4.28□□□□□ -1.72
RNU6-554P-201ENST00000410466 CDK15Q96Q40 435 aa4.28□□□□□ -1.72
RNU6-554P-201ENST00000410466 ZFP64Q9NPA5 681 aa4.28□□□□□ -1.72
RNU6-554P-201ENST00000410466 MS4A1P11836 297 aa4.27□□□□□ -1.73
RNU6-554P-201ENST00000410466 USP46P62068 366 aa4.27□□□□□ -1.73
RNU6-554P-201ENST00000410466 HIC1Q14526 733 aa4.27□□□□□ -1.73
RNU6-554P-201ENST00000410466 RETREG3Q86VR2 466 aa4.26□□□□□ -1.73
RNU6-554P-201ENST00000410466 HLA-CQ95604 372 aa4.26□□□□□ -1.73
RNU6-554P-201ENST00000410466 MBIPQ9NS73 344 aa4.26□□□□□ -1.73
RNU6-554P-201ENST00000410466 MKL2Q9ULH7 1088 aa4.26□□□□□ -1.73
RNU6-554P-201ENST00000410466 IGF1RP08069 1367 aa4.26□□□□□ -1.73
RNU6-554P-201ENST00000410466 ARTNQ5T4W7 220 aa4.25□□□□□ -1.73
RNU6-554P-201ENST00000410466 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
RNU6-554P-201ENST00000410466 PTPRNQ16849 979 aa4.24□□□□□ -1.73
RNU6-554P-201ENST00000410466 SYMPKQ92797 1274 aaKnown RBP4.24□□□□□ -1.73
RNU6-554P-201ENST00000410466 LRRC4BQ9NT99 713 aa4.24□□□□□ -1.73
RNU6-554P-201ENST00000410466 EVA1BQ9NVM1 165 aa4.24□□□□□ -1.73
RNU6-554P-201ENST00000410466 ARID1BQ8NFD5 2236 aaPredicted RBP4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 C1QTNF9BB2RNN3 333 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 SPINT1O43278 529 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 HOXA2O43364 376 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 CD46P15529 392 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 COL8A1P27658 744 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 KCNH2Q12809 1159 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 GRIN2CQ14957 1233 aa4.23□□□□□ -1.73
RNU6-554P-201ENST00000410466 YBX3P16989 372 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 GRM5P41594 1212 aa4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 SNRPNP63162 240 aaKnown RBP4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 GUCA2AQ02747 115 aa4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 DOC2BQ14184 412 aa4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 ACDQ96AP0 544 aa4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 EMILIN1Q9Y6C2 1016 aa4.22□□□□□ -1.73
RNU6-554P-201ENST00000410466 FSHRP23945 695 aa4.21□□□□□ -1.74
RNU6-554P-201ENST00000410466 FOXD4L6Q3SYB3 417 aaPredicted RBP4.21□□□□□ -1.74
RNU6-554P-201ENST00000410466 FOXR1Q6PIV2 292 aa4.21□□□□□ -1.74
RNU6-554P-201ENST00000410466 FOXD4L3Q6VB84 417 aaPredicted RBP4.21□□□□□ -1.74
RNU6-554P-201ENST00000410466 CD163Q86VB7 1156 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms