RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TRIM32Q13049 653 aa8.34□□□□□ -1.07
LSM5-205ENST00000409952 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
LSM5-205ENST00000409952 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
LSM5-205ENST00000409952 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
LSM5-205ENST00000409952 PKD2L1Q9P0L9 805 aa8.33□□□□□ -1.08
LSM5-205ENST00000409952 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
LSM5-205ENST00000409952 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
LSM5-205ENST00000409952 ZBTB24O43167 697 aaPredicted RBP8.31□□□□□ -1.08
LSM5-205ENST00000409952 CCDC24Q8N4L8 307 aa8.31□□□□□ -1.08
LSM5-205ENST00000409952 CLUAP1Q96AJ1 413 aa8.31□□□□□ -1.08
LSM5-205ENST00000409952 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
LSM5-205ENST00000409952 WNT7BP56706 349 aa8.3□□□□□ -1.08
LSM5-205ENST00000409952 SKOR1P84550 965 aa8.3□□□□□ -1.08
LSM5-205ENST00000409952 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
LSM5-205ENST00000409952 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
LSM5-205ENST00000409952 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
LSM5-205ENST00000409952 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
LSM5-205ENST00000409952 WNT7AO00755 349 aa8.28□□□□□ -1.08
LSM5-205ENST00000409952 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
LSM5-205ENST00000409952 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
LSM5-205ENST00000409952 RFC5P40937 340 aa8.27□□□□□ -1.09
LSM5-205ENST00000409952 TOR4AQ9NXH8 423 aa8.26□□□□□ -1.09
LSM5-205ENST00000409952 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
LSM5-205ENST00000409952 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
LSM5-205ENST00000409952 SH3BP2P78314 561 aa8.25□□□□□ -1.09
LSM5-205ENST00000409952 MCM6Q14566 821 aa8.25□□□□□ -1.09
LSM5-205ENST00000409952 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
LSM5-205ENST00000409952 SIAH2O43255 324 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 TMEM259Q4ZIN3 620 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
LSM5-205ENST00000409952 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 LRRN4Q8WUT4 740 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 BAP1Q92560 729 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
LSM5-205ENST00000409952 CCDC97Q96F63 343 aaPredicted RBP8.23□□□□□ -1.09
LSM5-205ENST00000409952 SERPINA10Q9UK55 444 aa8.23□□□□□ -1.09
LSM5-205ENST00000409952 CTHP32929 405 aa8.22□□□□□ -1.09
LSM5-205ENST00000409952 TSC1Q92574 1164 aa8.22□□□□□ -1.09
LSM5-205ENST00000409952 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
LSM5-205ENST00000409952 SOCS7O14512 581 aa8.21□□□□□ -1.1
LSM5-205ENST00000409952 RAD21O60216 631 aa8.21□□□□□ -1.1
LSM5-205ENST00000409952 DGAT1O75907 488 aa8.21□□□□□ -1.1
LSM5-205ENST00000409952 MYT1Q01538 1121 aa8.21□□□□□ -1.1
LSM5-205ENST00000409952 FOXC1Q12948 553 aa8.21□□□□□ -1.1
LSM5-205ENST00000409952 AP1G2O75843 785 aa8.2□□□□□ -1.1
LSM5-205ENST00000409952 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
LSM5-205ENST00000409952 MPNDQ8N594 471 aa8.2□□□□□ -1.1
LSM5-205ENST00000409952 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
LSM5-205ENST00000409952 ZNF777Q9ULD5 760 aaPredicted RBP8.2□□□□□ -1.1
LSM5-205ENST00000409952 POTECB2RU33 542 aa8.19□□□□□ -1.1
LSM5-205ENST00000409952 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
LSM5-205ENST00000409952 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
LSM5-205ENST00000409952 BANK1Q8NDB2 785 aa8.19□□□□□ -1.1
LSM5-205ENST00000409952 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
LSM5-205ENST00000409952 GPKOWQ92917 476 aaPredicted RBP eCLIP8.19□□□□□ -1.1
LSM5-205ENST00000409952 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
LSM5-205ENST00000409952 AVPP01185 164 aa8.18□□□□□ -1.1
LSM5-205ENST00000409952 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
LSM5-205ENST00000409952 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
LSM5-205ENST00000409952 SH3BP5LQ7L8J4 393 aa8.18□□□□□ -1.1
LSM5-205ENST00000409952 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
LSM5-205ENST00000409952 SMPD1P17405 629 aa8.17□□□□□ -1.1
LSM5-205ENST00000409952 VARSP26640 1264 aaKnown RBP8.17□□□□□ -1.1
LSM5-205ENST00000409952 CYP4X1Q8N118 509 aa8.17□□□□□ -1.1
LSM5-205ENST00000409952 FNBP4Q8N3X1 1017 aaPredicted RBP8.17□□□□□ -1.1
LSM5-205ENST00000409952 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
LSM5-205ENST00000409952 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
LSM5-205ENST00000409952 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
LSM5-205ENST00000409952 NR6A1Q15406 480 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 TMCO4Q5TGY1 634 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 NBPF14Q5TI25 921 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 EPS8L1Q8TE68 723 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 FOXJ1Q92949 421 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
LSM5-205ENST00000409952 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
LSM5-205ENST00000409952 PDXDC2PQ6P474 469 aa8.15□□□□□ -1.1
LSM5-205ENST00000409952 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.1
LSM5-205ENST00000409952 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
LSM5-205ENST00000409952 J3QL48 77 aa8.14□□□□□ -1.11
LSM5-205ENST00000409952 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
LSM5-205ENST00000409952 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
LSM5-205ENST00000409952 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
LSM5-205ENST00000409952 DACH1Q9UI36 760 aa8.14□□□□□ -1.11
LSM5-205ENST00000409952 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
LSM5-205ENST00000409952 PKDCCQ504Y2 493 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
LSM5-205ENST00000409952 RETREG2Q8NC44 543 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 MTMR14Q8NCE2 650 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 GPSM3Q9Y4H4 160 aa8.13□□□□□ -1.11
LSM5-205ENST00000409952 TTC24A2A3L6 582 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms