RNA–Protein interactions for RNA: ENST00000397677.5

CHMP7-202, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-202ENST00000397677 TMEM63CQ9P1W3 806 aa17.03■□□□□ 0.32
CHMP7-202ENST00000397677 PDLIM2Q96JY6 352 aa17.03■□□□□ 0.32
CHMP7-202ENST00000397677 ZSCAN20P17040 1043 aaPredicted RBP17.03■□□□□ 0.32
CHMP7-202ENST00000397677 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
CHMP7-202ENST00000397677 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
CHMP7-202ENST00000397677 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
CHMP7-202ENST00000397677 HS1BP3Q53T59 392 aa17.02■□□□□ 0.32
CHMP7-202ENST00000397677 MTERF4Q7Z6M4 381 aaKnown RBP17.02■□□□□ 0.32
CHMP7-202ENST00000397677 DMTNQ08495 405 aa17.02■□□□□ 0.31
CHMP7-202ENST00000397677 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.31
CHMP7-202ENST00000397677 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
CHMP7-202ENST00000397677 APBB1O00213 710 aa17.01■□□□□ 0.31
CHMP7-202ENST00000397677 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17■□□□□ 0.31
CHMP7-202ENST00000397677 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
CHMP7-202ENST00000397677 ADAMTS12P58397 1594 aa17■□□□□ 0.31
CHMP7-202ENST00000397677 PPP4R3BQ5MIZ7 849 aa17■□□□□ 0.31
CHMP7-202ENST00000397677 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
CHMP7-202ENST00000397677 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
CHMP7-202ENST00000397677 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
CHMP7-202ENST00000397677 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 SYNMO15061 1565 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 PLXNC1O60486 1568 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 NUCB2P80303 420 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CHMP7-202ENST00000397677 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
CHMP7-202ENST00000397677 KIAA2012Q0VF49 1180 aa16.99■□□□□ 0.31
CHMP7-202ENST00000397677 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
CHMP7-202ENST00000397677 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
CHMP7-202ENST00000397677 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CHMP7-202ENST00000397677 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
CHMP7-202ENST00000397677 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
CHMP7-202ENST00000397677 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
CHMP7-202ENST00000397677 LRSAM1Q6UWE0 723 aa16.98■□□□□ 0.31
CHMP7-202ENST00000397677 NUP160Q12769 1436 aa16.97■□□□□ 0.31
CHMP7-202ENST00000397677 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
CHMP7-202ENST00000397677 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
CHMP7-202ENST00000397677 TTC12Q9H892 705 aaPredicted RBP16.97■□□□□ 0.31
CHMP7-202ENST00000397677 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
CHMP7-202ENST00000397677 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
CHMP7-202ENST00000397677 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
CHMP7-202ENST00000397677 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
CHMP7-202ENST00000397677 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
CHMP7-202ENST00000397677 LAMC1P11047 1609 aa16.96■□□□□ 0.3
CHMP7-202ENST00000397677 VGLL3A8MV65 326 aa16.95■□□□□ 0.3
CHMP7-202ENST00000397677 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
CHMP7-202ENST00000397677 CDC45O75419 566 aa16.94■□□□□ 0.3
CHMP7-202ENST00000397677 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
CHMP7-202ENST00000397677 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
CHMP7-202ENST00000397677 CHGAP10645 457 aaKnown RBP16.94■□□□□ 0.3
CHMP7-202ENST00000397677 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
CHMP7-202ENST00000397677 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
CHMP7-202ENST00000397677 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
CHMP7-202ENST00000397677 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
CHMP7-202ENST00000397677 RABEP1Q15276 862 aa16.92■□□□□ 0.3
CHMP7-202ENST00000397677 USP25Q9UHP3 1055 aa16.92■□□□□ 0.3
CHMP7-202ENST00000397677 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
CHMP7-202ENST00000397677 MCM5P33992 734 aa16.92■□□□□ 0.3
CHMP7-202ENST00000397677 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
CHMP7-202ENST00000397677 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
CHMP7-202ENST00000397677 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
CHMP7-202ENST00000397677 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
CHMP7-202ENST00000397677 MYOM1P52179 1685 aa16.91■□□□□ 0.3
CHMP7-202ENST00000397677 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
CHMP7-202ENST00000397677 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
CHMP7-202ENST00000397677 NOLC1Q14978 699 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHMP7-202ENST00000397677 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 ATP10BO94823 1461 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 GRIN2AQ12879 1464 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 ZBTB22O15209 634 aa16.9■□□□□ 0.3
CHMP7-202ENST00000397677 CYP2E1P05181 493 aaPredicted RBP16.9■□□□□ 0.3
CHMP7-202ENST00000397677 U2AF2P26368 475 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■■■□ 26.4
CHMP7-202ENST00000397677 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
CHMP7-202ENST00000397677 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHMP7-202ENST00000397677 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
CHMP7-202ENST00000397677 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
CHMP7-202ENST00000397677 OTUD7AQ8TE49 926 aaPredicted RBP16.89■□□□□ 0.29
CHMP7-202ENST00000397677 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
CHMP7-202ENST00000397677 SIRT2Q8IXJ6 389 aa16.89■□□□□ 0.29
CHMP7-202ENST00000397677 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
CHMP7-202ENST00000397677 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
CHMP7-202ENST00000397677 BCL2L12Q9HB09 334 aa16.88■□□□□ 0.29
CHMP7-202ENST00000397677 IQSEC2Q5JU85 1478 aa16.88■□□□□ 0.29
CHMP7-202ENST00000397677 ST18O60284 1047 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 TMEM132EQ6IEE7 984 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
CHMP7-202ENST00000397677 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
CHMP7-202ENST00000397677 ZBTB7BO15156 539 aaPredicted RBP16.86■□□□□ 0.29
CHMP7-202ENST00000397677 KDM5AP29375 1690 aaKnown RBP16.86■□□□□ 0.29
CHMP7-202ENST00000397677 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
CHMP7-202ENST00000397677 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
CHMP7-202ENST00000397677 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
CHMP7-202ENST00000397677 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms