RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CFAP44Q96MT7 982 aa7.65□□□□□ -1.19
PTPRD-206ENST00000397617 NALCNQ8IZF0 1738 aa7.65□□□□□ -1.19
PTPRD-206ENST00000397617 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.19
PTPRD-206ENST00000397617 FAM9BQ8IZU0 186 aa7.65□□□□□ -1.19
PTPRD-206ENST00000397617 ARHGAP45Q92619 1136 aa7.65□□□□□ -1.19
PTPRD-206ENST00000397617 COL3A1P02461 1466 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-206ENST00000397617 TRAK1Q9UPV9 953 aa7.64□□□□□ -1.19
PTPRD-206ENST00000397617 NWD1Q149M9 1564 aa7.64□□□□□ -1.19
PTPRD-206ENST00000397617 IQSEC2Q5JU85 1478 aa7.64□□□□□ -1.19
PTPRD-206ENST00000397617 KIF20BQ96Q89 1820 aa7.64□□□□□ -1.19
PTPRD-206ENST00000397617 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
PTPRD-206ENST00000397617 TCERG1O14776 1098 aaKnown RBP7.64□□□□□ -1.19
PTPRD-206ENST00000397617 SLFN5Q08AF3 891 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 KIF16BQ96L93 1317 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 OVOS2A0A0J9YW53 1432 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 OVOS2Q6IE36 1432 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 HTATSF1O43719 755 aaKnown RBP7.63□□□□□ -1.19
PTPRD-206ENST00000397617 RRP1P56182 461 aaKnown RBP7.63□□□□□ -1.19
PTPRD-206ENST00000397617 ANKLE2Q86XL3 938 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 CHD2O14647 1828 aaKnown RBP7.63□□□□□ -1.19
PTPRD-206ENST00000397617 PRAM1Q96QH2 718 aa7.63□□□□□ -1.19
PTPRD-206ENST00000397617 FYB1O15117 783 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 SLC12A5Q9H2X9 1139 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 OVOS2A0A0G2JMS6 1433 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 USP6P35125 1406 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 ALDH1L2Q3SY69 923 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 SRPK2P78362 688 aaKnown RBP7.62□□□□□ -1.19
PTPRD-206ENST00000397617 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 FANCIQ9NVI1 1328 aa7.62□□□□□ -1.19
PTPRD-206ENST00000397617 IPO8O15397 1037 aaKnown RBP7.61□□□□□ -1.19
PTPRD-206ENST00000397617 MAPK8IP3Q9UPT6 1336 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 NRKQ7Z2Y5 1582 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 KIAA0232Q92628 1395 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 SHPRHQ149N8 1683 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 FLT4P35916 1363 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 TXNDC2Q86VQ3 553 aa7.61□□□□□ -1.19
PTPRD-206ENST00000397617 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-206ENST00000397617 NCAPD2Q15021 1401 aa7.6□□□□□ -1.19
PTPRD-206ENST00000397617 FKBP8Q14318 412 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 SBNO1A3KN83 1393 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 DIAPH1O60610 1272 aaKnown RBP7.59□□□□□ -1.19
PTPRD-206ENST00000397617 METP08581 1390 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 PLEKHH1Q9ULM0 1364 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 HOXB7P09629 217 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 MTHFSP49914 203 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 HDAC5Q9UQL6 1122 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 KIF1AQ12756 1690 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 CENPQQ7L2Z9 268 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-206ENST00000397617 CDK19Q9BWU1 502 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 KCNA6P17658 529 aa7.59□□□□□ -1.19
PTPRD-206ENST00000397617 NUDT16Q96DE0 195 aaKnown RBP7.59□□□□□ -1.19
PTPRD-206ENST00000397617 COG3Q96JB2 828 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 CCDC184Q52MB2 194 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 ARHGEF10O15013 1369 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 GNAI1P63096 354 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 KCNH5Q8NCM2 988 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 MAP2P11137 1827 aaKnown RBP7.58□□□□□ -1.2
PTPRD-206ENST00000397617 FMN2Q9NZ56 1722 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
PTPRD-206ENST00000397617 TMEM132EQ6IEE7 984 aa7.57□□□□□ -1.2
PTPRD-206ENST00000397617 CCDC136Q96JN2 1154 aa7.57□□□□□ -1.2
PTPRD-206ENST00000397617 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
PTPRD-206ENST00000397617 POLR3GLQ9BT43 218 aa7.56□□□□□ -1.2
PTPRD-206ENST00000397617 IFT57Q9NWB7 429 aa7.56□□□□□ -1.2
PTPRD-206ENST00000397617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTPRD-206ENST00000397617 TICAM2Q86XR7 235 aa7.55□□□□□ -1.2
PTPRD-206ENST00000397617 NFE2L2Q16236 605 aa7.55□□□□□ -1.2
PTPRD-206ENST00000397617 CC2D1BQ5T0F9 858 aaKnown RBP7.55□□□□□ -1.2
PTPRD-206ENST00000397617 CABP1Q9NZU7 370 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 POLKQ9UBT6 870 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 NPHP4O75161 1426 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-206ENST00000397617 MED1Q15648 1581 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-206ENST00000397617 U2AF1L5P0DN76 240 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-206ENST00000397617 U2AF1Q01081 240 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPRD-206ENST00000397617 CADPS2Q86UW7 1296 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 GAS2L2Q8NHY3 880 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 MINK1Q8N4C8 1332 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-206ENST00000397617 APAF1O14727 1248 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 PMFBP1Q8TBY8 1022 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 ZNF853P0CG23 659 aa7.54□□□□□ -1.2
PTPRD-206ENST00000397617 LTKP29376 864 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 TMPOP42166 694 aaKnown RBP7.53□□□□□ -1.2
PTPRD-206ENST00000397617 DDX19BQ9UMR2 479 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 MSH6P52701 1360 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 API5Q9BZZ5 524 aaKnown RBP7.53□□□□□ -1.2
PTPRD-206ENST00000397617 C19orf44Q9H6X5 657 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 RGPD1P0DJD0 1748 aa7.53□□□□□ -1.2
PTPRD-206ENST00000397617 IGSF1Q8N6C5 1336 aa7.52□□□□□ -1.2
PTPRD-206ENST00000397617 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.21
PTPRD-206ENST00000397617 PLEKHF1Q96S99 279 aa7.52□□□□□ -1.21
PTPRD-206ENST00000397617 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.52□□□□□ -1.21
PTPRD-206ENST00000397617 ZKSCAN2Q63HK3 967 aa7.52□□□□□ -1.21
PTPRD-206ENST00000397617 HDAC1Q13547 482 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-206ENST00000397617 DMRT2Q9Y5R5 561 aa7.51□□□□□ -1.21
PTPRD-206ENST00000397617 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
PTPRD-206ENST00000397617 CPDO75976 1380 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms