RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ADGRB2O60241 1585 aa18.64■□□□□ 0.57
SEC13-209ENST00000397117 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
SEC13-209ENST00000397117 ROCK2O75116 1388 aaKnown RBP18.62■□□□□ 0.57
SEC13-209ENST00000397117 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
SEC13-209ENST00000397117 LRP5O75197 1615 aa18.61■□□□□ 0.57
SEC13-209ENST00000397117 COL14A1Q05707 1796 aaKnown RBP18.6■□□□□ 0.57
SEC13-209ENST00000397117 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEC13-209ENST00000397117 FAM98CQ17RN3 349 aaKnown RBP18.6■□□□□ 0.57
SEC13-209ENST00000397117 CARD11Q9BXL7 1154 aa18.6■□□□□ 0.57
SEC13-209ENST00000397117 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
SEC13-209ENST00000397117 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
SEC13-209ENST00000397117 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.57
SEC13-209ENST00000397117 BAG6P46379 1132 aa18.58■□□□□ 0.56
SEC13-209ENST00000397117 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
SEC13-209ENST00000397117 TRAK1Q9UPV9 953 aa18.58■□□□□ 0.56
SEC13-209ENST00000397117 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
SEC13-209ENST00000397117 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.56
SEC13-209ENST00000397117 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
SEC13-209ENST00000397117 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
SEC13-209ENST00000397117 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
SEC13-209ENST00000397117 A0A0G2JS52 829 aa18.56■□□□□ 0.56
SEC13-209ENST00000397117 MYT1Q01538 1121 aa18.56■□□□□ 0.56
SEC13-209ENST00000397117 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
SEC13-209ENST00000397117 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
SEC13-209ENST00000397117 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
SEC13-209ENST00000397117 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
SEC13-209ENST00000397117 RGPD1P0DJD0 1748 aa18.55■□□□□ 0.56
SEC13-209ENST00000397117 PSDA5PKW4 1024 aaPredicted RBP18.55■□□□□ 0.56
SEC13-209ENST00000397117 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
SEC13-209ENST00000397117 USP47Q96K76 1375 aa18.54■□□□□ 0.56
SEC13-209ENST00000397117 THSD7AQ9UPZ6 1657 aa18.53■□□□□ 0.56
SEC13-209ENST00000397117 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.56
SEC13-209ENST00000397117 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
SEC13-209ENST00000397117 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.55
SEC13-209ENST00000397117 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.55
SEC13-209ENST00000397117 TNS1Q9HBL0 1735 aaKnown RBP18.5■□□□□ 0.55
SEC13-209ENST00000397117 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
SEC13-209ENST00000397117 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
SEC13-209ENST00000397117 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SEC13-209ENST00000397117 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
SEC13-209ENST00000397117 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
SEC13-209ENST00000397117 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
SEC13-209ENST00000397117 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
SEC13-209ENST00000397117 KIAA0232Q92628 1395 aa18.47■□□□□ 0.55
SEC13-209ENST00000397117 ATP7BP35670 1465 aa18.46■□□□□ 0.55
SEC13-209ENST00000397117 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
SEC13-209ENST00000397117 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
SEC13-209ENST00000397117 CHRNA2Q15822 529 aa18.45■□□□□ 0.54
SEC13-209ENST00000397117 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
SEC13-209ENST00000397117 CAMKK2Q96RR4 588 aa18.45■□□□□ 0.54
SEC13-209ENST00000397117 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
SEC13-209ENST00000397117 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SEC13-209ENST00000397117 TRIM37O94972 964 aa18.42■□□□□ 0.54
SEC13-209ENST00000397117 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
SEC13-209ENST00000397117 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
SEC13-209ENST00000397117 STRN4Q9NRL3 753 aa18.42■□□□□ 0.54
SEC13-209ENST00000397117 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
SEC13-209ENST00000397117 TOPAZ1Q8N9V7 1692 aa18.4■□□□□ 0.54
SEC13-209ENST00000397117 NUTM2GQ5VZR2 741 aa18.4■□□□□ 0.54
SEC13-209ENST00000397117 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
SEC13-209ENST00000397117 ACEP12821 1306 aa18.39■□□□□ 0.53
SEC13-209ENST00000397117 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
SEC13-209ENST00000397117 APBA3O96018 575 aa18.38■□□□□ 0.53
SEC13-209ENST00000397117 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
SEC13-209ENST00000397117 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
SEC13-209ENST00000397117 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
SEC13-209ENST00000397117 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
SEC13-209ENST00000397117 EVA1CP58658 441 aa18.37■□□□□ 0.53
SEC13-209ENST00000397117 RREB1Q92766 1687 aa18.37■□□□□ 0.53
SEC13-209ENST00000397117 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
SEC13-209ENST00000397117 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
SEC13-209ENST00000397117 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
SEC13-209ENST00000397117 LMO7Q8WWI1 1683 aa18.36■□□□□ 0.53
SEC13-209ENST00000397117 CPDO75976 1380 aa18.36■□□□□ 0.53
SEC13-209ENST00000397117 PDE3BQ13370 1112 aa18.35■□□□□ 0.53
SEC13-209ENST00000397117 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
SEC13-209ENST00000397117 USP19O94966 1318 aa18.35■□□□□ 0.53
SEC13-209ENST00000397117 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
SEC13-209ENST00000397117 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
SEC13-209ENST00000397117 NUP188Q5SRE5 1749 aa18.34■□□□□ 0.53
SEC13-209ENST00000397117 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
SEC13-209ENST00000397117 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
SEC13-209ENST00000397117 CENPJQ9HC77 1338 aaPredicted RBP18.33■□□□□ 0.53
SEC13-209ENST00000397117 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
SEC13-209ENST00000397117 TESK2Q96S53 571 aa18.33■□□□□ 0.52
SEC13-209ENST00000397117 CCDC7Q96M83 1385 aa18.33■□□□□ 0.52
SEC13-209ENST00000397117 TMF1P82094 1093 aa18.32■□□□□ 0.52
SEC13-209ENST00000397117 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
SEC13-209ENST00000397117 DDX10Q13206 875 aaKnown RBP18.31■□□□□ 0.52
SEC13-209ENST00000397117 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
SEC13-209ENST00000397117 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
SEC13-209ENST00000397117 GCP02774 474 aa18.31■□□□□ 0.52
SEC13-209ENST00000397117 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
SEC13-209ENST00000397117 PARP4Q9UKK3 1724 aaKnown RBP18.3■□□□□ 0.52
SEC13-209ENST00000397117 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
SEC13-209ENST00000397117 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
SEC13-209ENST00000397117 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
SEC13-209ENST00000397117 CDCA8Q53HL2 280 aa18.27■□□□□ 0.52
SEC13-209ENST00000397117 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
SEC13-209ENST00000397117 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms