RNA–Protein interactions for RNA: ENST00000396791.7

CEP44-202, Transcript of centrosomal protein 44, humanhuman

TSL 1 (best)

Gene CEP44, Length 3,824 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP44-202ENST00000396791 TMEM94Q12767 1356 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
CEP44-202ENST00000396791 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 LRRC7Q96NW7 1537 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 C19orf44Q9H6X5 657 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
CEP44-202ENST00000396791 ZBED9Q6R2W3 1325 aa11.69□□□□□ -0.54
CEP44-202ENST00000396791 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
CEP44-202ENST00000396791 NME9Q86XW9 330 aa11.68□□□□□ -0.54
CEP44-202ENST00000396791 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
CEP44-202ENST00000396791 MARF1Q9Y4F3 1742 aaKnown RBP11.68□□□□□ -0.54
CEP44-202ENST00000396791 MAP2P11137 1827 aaKnown RBP11.68□□□□□ -0.54
CEP44-202ENST00000396791 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
CEP44-202ENST00000396791 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
CEP44-202ENST00000396791 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
CEP44-202ENST00000396791 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 CFAP53Q96M91 514 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 MTHFSP49914 203 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 WDR43Q15061 677 aaKnown RBP eCLIP11.67□□□□□ -0.54
CEP44-202ENST00000396791 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
CEP44-202ENST00000396791 COG3Q96JB2 828 aa11.66□□□□□ -0.54
CEP44-202ENST00000396791 MST1RQ04912 1400 aa11.66□□□□□ -0.54
CEP44-202ENST00000396791 TRPM3Q9HCF6 1732 aaPredicted RBP11.65□□□□□ -0.54
CEP44-202ENST00000396791 PNPLA6Q8IY17 1366 aa11.65□□□□□ -0.54
CEP44-202ENST00000396791 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
CEP44-202ENST00000396791 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.55
CEP44-202ENST00000396791 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
CEP44-202ENST00000396791 MSH6P52701 1360 aa11.64□□□□□ -0.55
CEP44-202ENST00000396791 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
CEP44-202ENST00000396791 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
CEP44-202ENST00000396791 ATF3P18847 181 aa11.63□□□□□ -0.55
CEP44-202ENST00000396791 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
CEP44-202ENST00000396791 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
CEP44-202ENST00000396791 PEAK1Q9H792 1746 aa11.61□□□□□ -0.55
CEP44-202ENST00000396791 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
CEP44-202ENST00000396791 ALS2Q96Q42 1657 aa11.6□□□□□ -0.55
CEP44-202ENST00000396791 PSME1Q06323 249 aa11.59□□□□□ -0.55
CEP44-202ENST00000396791 NUDCQ9Y266 331 aa11.59□□□□□ -0.55
CEP44-202ENST00000396791 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
CEP44-202ENST00000396791 DIAPH1O60610 1272 aaKnown RBP11.58□□□□□ -0.56
CEP44-202ENST00000396791 SLIT3O75094 1523 aa11.58□□□□□ -0.56
CEP44-202ENST00000396791 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
CEP44-202ENST00000396791 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
CEP44-202ENST00000396791 NGEFQ8N5V2 710 aa11.58□□□□□ -0.56
CEP44-202ENST00000396791 NFAT5O94916 1531 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 KIF24Q5T7B8 1368 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 FBLN1P23142 703 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 LTN1O94822 1766 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 NLRP6P59044 892 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 PDE3BQ13370 1112 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 ABTB2Q8N961 1025 aa11.57□□□□□ -0.56
CEP44-202ENST00000396791 RUNDC1Q96C34 613 aa11.56□□□□□ -0.56
CEP44-202ENST00000396791 PXDNQ92626 1479 aa11.56□□□□□ -0.56
CEP44-202ENST00000396791 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
CEP44-202ENST00000396791 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
CEP44-202ENST00000396791 RRS1Q15050 365 aaKnown RBP11.56□□□□□ -0.56
CEP44-202ENST00000396791 FOXO3O43524 673 aa11.56□□□□□ -0.56
CEP44-202ENST00000396791 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
CEP44-202ENST00000396791 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
CEP44-202ENST00000396791 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
CEP44-202ENST00000396791 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
CEP44-202ENST00000396791 IL13P35225 146 aa11.55□□□□□ -0.56
CEP44-202ENST00000396791 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
CEP44-202ENST00000396791 NHSL1Q5SYE7 1610 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 CRYBG1Q9Y4K1 1723 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
CEP44-202ENST00000396791 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
CEP44-202ENST00000396791 FLT4P35916 1363 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 USP19O94966 1318 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
CEP44-202ENST00000396791 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
CEP44-202ENST00000396791 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
CEP44-202ENST00000396791 APAF1O14727 1248 aa11.53□□□□□ -0.56
CEP44-202ENST00000396791 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
CEP44-202ENST00000396791 KCNH5Q8NCM2 988 aa11.53□□□□□ -0.56
CEP44-202ENST00000396791 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
CEP44-202ENST00000396791 BRINP3Q76B58 766 aa11.52□□□□□ -0.56
CEP44-202ENST00000396791 SLAIN2Q9P270 581 aa11.52□□□□□ -0.56
CEP44-202ENST00000396791 FCHSD2O94868 740 aa11.52□□□□□ -0.57
CEP44-202ENST00000396791 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
CEP44-202ENST00000396791 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.57
CEP44-202ENST00000396791 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
CEP44-202ENST00000396791 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
CEP44-202ENST00000396791 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
CEP44-202ENST00000396791 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
CEP44-202ENST00000396791 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
CEP44-202ENST00000396791 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
CEP44-202ENST00000396791 SALL2Q9Y467 1007 aaPredicted RBP11.5□□□□□ -0.57
CEP44-202ENST00000396791 PHF23Q9BUL5 403 aaPredicted RBP11.5□□□□□ -0.57
CEP44-202ENST00000396791 ARHGEF10O15013 1369 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms