RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 NME8Q8N427 588 aa5.96□□□□□ -1.46
TNFRSF17-202ENST00000396495 TSPAN18Q96SJ8 248 aa5.96□□□□□ -1.46
TNFRSF17-202ENST00000396495 TRAIPQ9BWF2 469 aa5.96□□□□□ -1.46
TNFRSF17-202ENST00000396495 RAI14Q9P0K7 980 aa5.96□□□□□ -1.46
TNFRSF17-202ENST00000396495 RNF40O75150 1001 aa5.95□□□□□ -1.46
TNFRSF17-202ENST00000396495 SMARCA4P51532 1647 aa5.95□□□□□ -1.46
TNFRSF17-202ENST00000396495 TNFRSF10AO00220 468 aa5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 APPP05067 770 aa5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 CALRP27797 417 aaKnown RBP5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 FAM50AQ14320 339 aaKnown RBP5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 CRIPAKQ8N1N5 446 aa5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 FEZ2Q9UHY8 353 aaPredicted RBP5.94□□□□□ -1.46
TNFRSF17-202ENST00000396495 GOLGA6L3A6NEY3 463 aa5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 FOXD4L5Q5VV16 416 aaPredicted RBP5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 FOXD4L4Q8WXT5 416 aaPredicted RBP5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 RYDENQ9NUL5 291 aaKnown RBP5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 TERF2IPQ9NYB0 399 aa5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 NUB1Q9Y5A7 615 aa5.93□□□□□ -1.46
TNFRSF17-202ENST00000396495 RNF223E7ERA6 249 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 IRF6O14896 467 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 AXIN1O15169 862 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 TPM2P07951 284 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 COPS2P61201 443 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 MTA1Q13330 715 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 ZKSCAN8Q15776 578 aaPredicted RBP5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 ANKRD23Q86SG2 305 aa5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 GMPR2Q9P2T1 348 aaKnown RBP5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 TOP2AP11388 1531 aaKnown RBP5.92□□□□□ -1.46
TNFRSF17-202ENST00000396495 GOLIM4O00461 696 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 TERTO14746 1132 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 GDF9O60383 454 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 ZPR1O75312 459 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 SLC4A3P48751 1232 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 MFAP1P55081 439 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 DMTNQ08495 405 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 SEMA3FQ13275 785 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 CTC1Q2NKJ3 1217 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 NBPF6Q5VWK0 638 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 NBPF5PQ86XG9 351 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 ANKLE1Q8NAG6 615 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 NBPF4Q96M43 638 aa5.91□□□□□ -1.46
TNFRSF17-202ENST00000396495 EIF4G1Q04637 1599 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 APLP1P51693 650 aa5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 MAP2K1Q02750 393 aaPredicted RBP5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 LMOD2Q6P5Q4 547 aa5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 MYH16Q9H6N6 1097 aa5.9□□□□□ -1.46
TNFRSF17-202ENST00000396495 WIZO95785 1651 aa5.9□□□□□ -1.47
TNFRSF17-202ENST00000396495 MCCD1P59942 119 aaPredicted RBP5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 SATB1Q01826 763 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 ANKRD13AQ8IZ07 590 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 ZSCAN1Q8NBB4 408 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 SLC16A10Q8TF71 515 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 ARHGEF1Q92888 912 aaKnown RBP5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 DDX27Q96GQ7 796 aaKnown RBP5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 DDRGK1Q96HY6 314 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 PRR14Q9BWN1 585 aa5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 ZC3H4Q9UPT8 1303 aaKnown RBP5.89□□□□□ -1.47
TNFRSF17-202ENST00000396495 NBPF26B4DH59 902 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 BRD1O95696 1058 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 ARID4AP29374 1257 aaPredicted RBP5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 CLCN1P35523 988 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 TERF1P54274 439 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 CDCA8Q53HL2 280 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 MTERF4Q7Z6M4 381 aaKnown RBP5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 FAM9BQ8IZU0 186 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 MSL3Q8N5Y2 521 aaKnown RBP5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 RBM33Q96EV2 1170 aaKnown RBP5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 GTPBP4Q9BZE4 634 aaKnown RBP5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 TSKSQ9UJT2 592 aa5.88□□□□□ -1.47
TNFRSF17-202ENST00000396495 TESPA1A2RU30 521 aaPredicted RBP5.87□□□□□ -1.47
TNFRSF17-202ENST00000396495 EXOC5O00471 708 aa5.87□□□□□ -1.47
TNFRSF17-202ENST00000396495 LETM1O95202 739 aaPredicted RBP5.87□□□□□ -1.47
TNFRSF17-202ENST00000396495 SSR1P43307 286 aaKnown RBP5.87□□□□□ -1.47
TNFRSF17-202ENST00000396495 RBM28Q9NW13 759 aaKnown RBP5.87□□□□□ -1.47
TNFRSF17-202ENST00000396495 TPD52L2O43399 206 aaKnown RBP5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 AVPP01185 164 aa5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 HELBQ8NG08 1087 aaPredicted RBP5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 UBA5Q9GZZ9 404 aa5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 SENP2Q9HC62 589 aa5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 RPS6KL1Q9Y6S9 549 aa5.86□□□□□ -1.47
TNFRSF17-202ENST00000396495 SMARCA2P51531 1590 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 HMGB1P1B2RPK0 211 aaPredicted RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 SMAPO00193 183 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 ZNF500O60304 480 aaPredicted RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 LIAT1Q6ZQX7 453 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 NOL8Q76FK4 1167 aaKnown RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 DDX46Q7L014 1031 aaKnown RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 EMID1Q96A84 441 aaPredicted RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 LARP6Q9BRS8 491 aaKnown RBP5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 CEP126Q9P2H0 1117 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 DACH1Q9UI36 760 aa5.85□□□□□ -1.47
TNFRSF17-202ENST00000396495 RGL2O15211 777 aa5.84□□□□□ -1.47
TNFRSF17-202ENST00000396495 ZRANB2O95218 330 aaKnown RBP eCLIP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms