RNA–Protein interactions for RNA: ENST00000391997.2

PDC-201, Transcript of phosducin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDC, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDC-201ENST00000391997 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
PDC-201ENST00000391997 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
PDC-201ENST00000391997 PER1O15534 1290 aaPredicted RBP11.55□□□□□ -0.56
PDC-201ENST00000391997 SIAH2O43255 324 aa11.55□□□□□ -0.56
PDC-201ENST00000391997 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
PDC-201ENST00000391997 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
PDC-201ENST00000391997 HPS1Q92902 700 aa11.55□□□□□ -0.56
PDC-201ENST00000391997 MAP10Q9P2G4 905 aa11.55□□□□□ -0.56
PDC-201ENST00000391997 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
PDC-201ENST00000391997 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
PDC-201ENST00000391997 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
PDC-201ENST00000391997 ZNF511Q8NB15 262 aa11.53□□□□□ -0.56
PDC-201ENST00000391997 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
PDC-201ENST00000391997 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
PDC-201ENST00000391997 ZNF775Q96BV0 537 aaPredicted RBP11.51□□□□□ -0.57
PDC-201ENST00000391997 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
PDC-201ENST00000391997 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
PDC-201ENST00000391997 WASF2Q9Y6W5 498 aa11.48□□□□□ -0.57
PDC-201ENST00000391997 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
PDC-201ENST00000391997 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
PDC-201ENST00000391997 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
PDC-201ENST00000391997 VARSP26640 1264 aaKnown RBP11.46□□□□□ -0.57
PDC-201ENST00000391997 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
PDC-201ENST00000391997 FOXJ1Q92949 421 aa11.46□□□□□ -0.57
PDC-201ENST00000391997 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
PDC-201ENST00000391997 C11orf95C9JLR9 678 aaPredicted RBP11.45□□□□□ -0.58
PDC-201ENST00000391997 ATP13A2Q9NQ11 1180 aa11.45□□□□□ -0.58
PDC-201ENST00000391997 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
PDC-201ENST00000391997 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
PDC-201ENST00000391997 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
PDC-201ENST00000391997 AGERQ15109 404 aa11.43□□□□□ -0.58
PDC-201ENST00000391997 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
PDC-201ENST00000391997 FAM174AQ8TBP5 190 aa11.4□□□□□ -0.58
PDC-201ENST00000391997 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
PDC-201ENST00000391997 ARID5BQ14865 1188 aa11.39□□□□□ -0.59
PDC-201ENST00000391997 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
PDC-201ENST00000391997 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
PDC-201ENST00000391997 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDC-201ENST00000391997 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
PDC-201ENST00000391997 MPNDQ8N594 471 aa11.38□□□□□ -0.59
PDC-201ENST00000391997 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
PDC-201ENST00000391997 NNTQ13423 1086 aa11.37□□□□□ -0.59
PDC-201ENST00000391997 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
PDC-201ENST00000391997 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
PDC-201ENST00000391997 BMP1P13497 986 aa11.35□□□□□ -0.59
PDC-201ENST00000391997 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
PDC-201ENST00000391997 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
PDC-201ENST00000391997 CDK15Q96Q40 435 aa11.35□□□□□ -0.59
PDC-201ENST00000391997 ADH1CP00326 375 aa11.34□□□□□ -0.59
PDC-201ENST00000391997 NBPF14Q5TI25 921 aa11.34□□□□□ -0.59
PDC-201ENST00000391997 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
PDC-201ENST00000391997 AP1G2O75843 785 aa11.33□□□□□ -0.6
PDC-201ENST00000391997 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
PDC-201ENST00000391997 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
PDC-201ENST00000391997 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
PDC-201ENST00000391997 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
PDC-201ENST00000391997 WDR4P57081 412 aaKnown RBP11.31□□□□□ -0.6
PDC-201ENST00000391997 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
PDC-201ENST00000391997 GRM5P41594 1212 aa11.3□□□□□ -0.6
PDC-201ENST00000391997 NR6A1Q15406 480 aa11.3□□□□□ -0.6
PDC-201ENST00000391997 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
PDC-201ENST00000391997 TIMP2P16035 220 aa11.29□□□□□ -0.6
PDC-201ENST00000391997 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
PDC-201ENST00000391997 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
PDC-201ENST00000391997 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
PDC-201ENST00000391997 FKBPLQ9UIM3 349 aa11.29□□□□□ -0.6
PDC-201ENST00000391997 NR3C2P08235 984 aa11.28□□□□□ -0.6
PDC-201ENST00000391997 C1QTNF2Q9BXJ5 285 aa11.28□□□□□ -0.6
PDC-201ENST00000391997 NR5A1Q13285 461 aa11.27□□□□□ -0.61
PDC-201ENST00000391997 GPKOWQ92917 476 aaPredicted RBP eCLIP11.27□□□□□ -0.61
PDC-201ENST00000391997 RFC5P40937 340 aa11.26□□□□□ -0.61
PDC-201ENST00000391997 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
PDC-201ENST00000391997 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
PDC-201ENST00000391997 VASH1Q7L8A9 365 aaPredicted RBP11.26□□□□□ -0.61
PDC-201ENST00000391997 ZIC2O95409 532 aaPredicted RBP11.25□□□□□ -0.61
PDC-201ENST00000391997 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
PDC-201ENST00000391997 ITPKCQ96DU7 683 aa11.25□□□□□ -0.61
PDC-201ENST00000391997 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
PDC-201ENST00000391997 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
PDC-201ENST00000391997 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
PDC-201ENST00000391997 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
PDC-201ENST00000391997 WFS1O76024 890 aa11.24□□□□□ -0.61
PDC-201ENST00000391997 FSHRP23945 695 aa11.24□□□□□ -0.61
PDC-201ENST00000391997 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
PDC-201ENST00000391997 LCE2AQ5TA79 106 aaPredicted RBP11.24□□□□□ -0.61
PDC-201ENST00000391997 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
PDC-201ENST00000391997 TRMT44Q8IYL2 757 aaKnown RBP11.24□□□□□ -0.61
PDC-201ENST00000391997 ARHGAP9Q9BRR9 750 aa11.24□□□□□ -0.61
PDC-201ENST00000391997 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
PDC-201ENST00000391997 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
PDC-201ENST00000391997 MRPL14Q6P1L8 145 aaKnown RBP11.23□□□□□ -0.61
PDC-201ENST00000391997 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
PDC-201ENST00000391997 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
PDC-201ENST00000391997 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
PDC-201ENST00000391997 SCARF1Q14162 830 aa11.21□□□□□ -0.61
PDC-201ENST00000391997 ZBTB33Q86T24 672 aa11.21□□□□□ -0.61
PDC-201ENST00000391997 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
PDC-201ENST00000391997 PTK2Q05397 1052 aa11.19□□□□□ -0.62
PDC-201ENST00000391997 ZC3H4Q9UPT8 1303 aaKnown RBP11.18□□□□□ -0.62
PDC-201ENST00000391997 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms