RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 CRTC2Q53ET0 693 aaPredicted RBP3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 DMRTA1Q5VZB9 504 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 RNF19BQ6ZMZ0 732 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 FAM174AQ8TBP5 190 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 CCER1Q8TC90 406 aaPredicted RBP3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 RABGEF1Q9UJ41 708 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 GNEQ9Y223 722 aaKnown RBP3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 AMOTL2Q9Y2J4 779 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 SLC27A5Q9Y2P5 690 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 AXIN2Q9Y2T1 843 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L15C9J2P7 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L10C9JJH3 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L13C9JLJ4 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L12C9JPN9 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L11C9JVI0 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L21D6R901 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L18D6R9N7 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L22D6RA61 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L17D6RBQ6 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L19D6RCP7 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L20D6RJB6 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 RASA1P20936 1047 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 CTHP32929 405 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 SCNN1AP37088 669 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 SERPINB4P48594 390 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP17L24Q0WX57 530 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 NCOA4Q13772 614 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 ELOAQ14241 798 aaKnown RBP3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 MORN1Q5T089 497 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 PHLDB3Q6NSJ2 640 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 LARP1Q6PKG0 1096 aaKnown RBP3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 BLOC1S3Q6QNY0 202 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 LYPD8Q6UX82 237 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 TXNDC2Q86VQ3 553 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 SLAIN2Q9P270 581 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 MAP10Q9P2G4 905 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 USP35Q9P2H5 1018 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 MKRN1Q9UHC7 482 aaKnown RBP3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 FKBPLQ9UIM3 349 aa3.07□□□□□ -1.92
SNORA48.1-201ENST00000390879 SSFA2P28290 1259 aa3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 KCNH2Q12809 1159 aa3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 Q3C1V9 767 aa3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 SLFNL1Q499Z3 407 aa3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 ZNF594Q96JF6 807 aaPredicted RBP3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 BIN2Q9UBW5 565 aaPredicted RBP3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 PCDHB9Q9Y5E1 797 aa3.06□□□□□ -1.92
SNORA48.1-201ENST00000390879 FAM196BA6NMK8 535 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 ARHGAP33O14559 1287 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 ACTN4O43707 911 aaKnown RBP3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 ATP2B4P23634 1241 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 ARID4AP29374 1257 aaPredicted RBP3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 PTK7Q13308 1070 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 VARS2Q5ST30 1063 aaKnown RBP3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 DESI1Q6ICB0 168 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 POTEEQ6S8J3 1075 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 RNF135Q8IUD6 432 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 PLEKHM2Q8IWE5 1019 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 NFATC2IPQ8NCF5 419 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 FAM200AQ8TCP9 573 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 RNF166Q96A37 237 aaPredicted RBP3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 USB1Q9BQ65 265 aaKnown RBP3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 VPS9D1Q9Y2B5 631 aa3.05□□□□□ -1.92
SNORA48.1-201ENST00000390879 ERBB3P21860 1342 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 RBM47A0AV96 593 aaKnown RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 SOWAHDA6NJG2 315 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 ATP5J2-PTCD1G3V325 749 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 SNPHO15079 494 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 LGR5O75473 907 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 ABL1P00519 1130 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 F12P00748 615 aaPredicted RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 MARSP56192 900 aaKnown RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 FAM69CQ0P6D2 419 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 DPYDQ12882 1025 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 DNAJC14Q6Y2X3 702 aaPredicted RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 ANKMY2Q8IV38 441 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 OGFOD1Q8N543 542 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 PLPP7Q8NBV4 271 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 MRRFQ96E11 262 aaKnown RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 LRCH3Q96II8 777 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 ZFRQ96KR1 1074 aaKnown RBP3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 BCL2L13Q9BXK5 485 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 NBPF3Q9H094 633 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 ANO2Q9NQ90 1003 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 CEP126Q9P2H0 1117 aa3.04□□□□□ -1.92
SNORA48.1-201ENST00000390879 PRMT3O60678 531 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 FMNL1O95466 1100 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 JUNDP17535 347 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 PTK2Q05397 1052 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 ZNF211Q13398 564 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 PTPRNQ16849 979 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 EML3Q32P44 896 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 TSGA10IPQ3SY00 556 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 NOM1Q5C9Z4 860 aaKnown RBP3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 BRICD5Q6PL45 260 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 LAPTM4BQ86VI4 370 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 GIPC2Q8TF65 315 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 CLP1Q92989 425 aaKnown RBP3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 PRIMPOLQ96LW4 560 aa3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 CDCA7Q9BWT1 371 aaPredicted RBP3.03□□□□□ -1.92
SNORA48.1-201ENST00000390879 SLC4A5Q9BY07 1137 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms