RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FOXD4L3Q6VB84 417 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-201ENST00000381513 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-201ENST00000381513 ZGPATQ8N5A5 531 aaKnown RBP23.24■■□□□ 1.31
SMARCD1-201ENST00000381513 AK9Q5TCS8 1911 aa23.24■■□□□ 1.31
SMARCD1-201ENST00000381513 USP25Q9UHP3 1055 aa23.23■■□□□ 1.31
SMARCD1-201ENST00000381513 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
SMARCD1-201ENST00000381513 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
SMARCD1-201ENST00000381513 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
SMARCD1-201ENST00000381513 GTF2F1P35269 517 aaKnown RBP eCLIP23.22■■□□□ 1.316e-17■■■■■ 36.5
SMARCD1-201ENST00000381513 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
SMARCD1-201ENST00000381513 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
SMARCD1-201ENST00000381513 TRPM1Q7Z4N2 1603 aa23.22■■□□□ 1.31
SMARCD1-201ENST00000381513 RABEP1Q15276 862 aa23.21■■□□□ 1.31
SMARCD1-201ENST00000381513 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
SMARCD1-201ENST00000381513 DIAPH3Q9NSV4 1193 aa23.2■■□□□ 1.3
SMARCD1-201ENST00000381513 NOB1Q9ULX3 412 aaKnown RBP23.2■■□□□ 1.3
SMARCD1-201ENST00000381513 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
SMARCD1-201ENST00000381513 ADGRL2O95490 1459 aa23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 RIOK3O14730 519 aaKnown RBP23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 MBD3O95983 291 aa23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 EXOSC9Q06265 439 aaKnown RBP23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 HNRNPMP52272 730 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 SSH1Q8WYL5 1049 aa23.18■■□□□ 1.3
SMARCD1-201ENST00000381513 WDR62O43379 1518 aa23.17■■□□□ 1.3
SMARCD1-201ENST00000381513 A2MP01023 1474 aa23.17■■□□□ 1.3
SMARCD1-201ENST00000381513 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
SMARCD1-201ENST00000381513 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 CYP2E1P05181 493 aaPredicted RBP23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 IRX5P78411 483 aaPredicted RBP23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 SYAP1Q96A49 352 aaPredicted RBP23.16■■□□□ 1.3
SMARCD1-201ENST00000381513 CDC45O75419 566 aa23.15■■□□□ 1.3
SMARCD1-201ENST00000381513 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
SMARCD1-201ENST00000381513 PRDM15P57071 1507 aaPredicted RBP23.15■■□□□ 1.3
SMARCD1-201ENST00000381513 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
SMARCD1-201ENST00000381513 ADCY5O95622 1261 aa23.15■■□□□ 1.3
SMARCD1-201ENST00000381513 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.3
SMARCD1-201ENST00000381513 ST18O60284 1047 aa23.14■■□□□ 1.29
SMARCD1-201ENST00000381513 ZBTB40Q9NUA8 1239 aa23.14■■□□□ 1.29
SMARCD1-201ENST00000381513 OGFRQ9NZT2 677 aa23.13■■□□□ 1.29
SMARCD1-201ENST00000381513 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
SMARCD1-201ENST00000381513 FEZ1Q99689 392 aa23.13■■□□□ 1.29
SMARCD1-201ENST00000381513 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
SMARCD1-201ENST00000381513 ERICH4A6NGS2 130 aa23.12■■□□□ 1.29
SMARCD1-201ENST00000381513 ZDHHC9Q9Y397 364 aa23.12■■□□□ 1.29
SMARCD1-201ENST00000381513 CCDC66A2RUB6 948 aa23.12■■□□□ 1.29
SMARCD1-201ENST00000381513 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
SMARCD1-201ENST00000381513 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
SMARCD1-201ENST00000381513 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
SMARCD1-201ENST00000381513 GDPD2Q9HCC8 539 aa23.1■■□□□ 1.29
SMARCD1-201ENST00000381513 ADGBQ8N7X0 1667 aa23.1■■□□□ 1.29
SMARCD1-201ENST00000381513 TRERF1Q96PN7 1200 aa23.1■■□□□ 1.29
SMARCD1-201ENST00000381513 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
SMARCD1-201ENST00000381513 PHF14O94880 888 aa23.08■■□□□ 1.29
SMARCD1-201ENST00000381513 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.28
SMARCD1-201ENST00000381513 NOL8Q76FK4 1167 aaKnown RBP23.08■■□□□ 1.28
SMARCD1-201ENST00000381513 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
SMARCD1-201ENST00000381513 SPC24Q8NBT2 197 aa23.07■■□□□ 1.28
SMARCD1-201ENST00000381513 TIGD1Q96MW7 591 aa23.07■■□□□ 1.28
SMARCD1-201ENST00000381513 NPC1L1Q9UHC9 1359 aa23.07■■□□□ 1.28
SMARCD1-201ENST00000381513 ANKRD7Q92527 254 aa23.06■■□□□ 1.28
SMARCD1-201ENST00000381513 GABPB1Q06547 395 aaPredicted RBP23.06■■□□□ 1.28
SMARCD1-201ENST00000381513 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
SMARCD1-201ENST00000381513 CERS3Q8IU89 383 aa23.05■■□□□ 1.28
SMARCD1-201ENST00000381513 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
SMARCD1-201ENST00000381513 SPTLC3Q9NUV7 552 aa23.05■■□□□ 1.28
SMARCD1-201ENST00000381513 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
SMARCD1-201ENST00000381513 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
SMARCD1-201ENST00000381513 DNAJC2Q99543 621 aaKnown RBP23.04■■□□□ 1.28
SMARCD1-201ENST00000381513 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
SMARCD1-201ENST00000381513 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
SMARCD1-201ENST00000381513 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
SMARCD1-201ENST00000381513 MTHFSP49914 203 aa23.03■■□□□ 1.28
SMARCD1-201ENST00000381513 PYCARDQ9ULZ3 195 aa23.03■■□□□ 1.28
SMARCD1-201ENST00000381513 ARHGAP31Q2M1Z3 1444 aa23.03■■□□□ 1.28
SMARCD1-201ENST00000381513 GCC1Q96CN9 775 aa23.03■■□□□ 1.28
SMARCD1-201ENST00000381513 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
SMARCD1-201ENST00000381513 SLFN14P0C7P3 912 aa23.01■■□□□ 1.27
SMARCD1-201ENST00000381513 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
SMARCD1-201ENST00000381513 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
SMARCD1-201ENST00000381513 GADD45BO75293 160 aaPredicted RBP23.01■■□□□ 1.27
SMARCD1-201ENST00000381513 NCBP1Q09161 790 aaKnown RBP23.01■■□□□ 1.27
SMARCD1-201ENST00000381513 UVSSAQ2YD98 709 aa23■■□□□ 1.27
SMARCD1-201ENST00000381513 USP26Q9BXU7 913 aa23■■□□□ 1.27
SMARCD1-201ENST00000381513 TRIM6-TRIM34B2RNG4 842 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 TRIM34Q9BYJ4 488 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 PTPRGP23470 1445 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 NAA30Q147X3 362 aaPredicted RBP22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 CCDC27Q2M243 656 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 KIAA1524Q8TCG1 905 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 CTNNA3Q9UI47 895 aa22.99■■□□□ 1.27
SMARCD1-201ENST00000381513 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
SMARCD1-201ENST00000381513 GSPT1P15170 499 aaKnown RBP22.98■■□□□ 1.27
SMARCD1-201ENST00000381513 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
SMARCD1-201ENST00000381513 APBB1O00213 710 aa22.97■■□□□ 1.27
SMARCD1-201ENST00000381513 C16orf45Q96MC5 204 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms