RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ARL1P40616 181 aaPredicted RBP15.75■□□□□ 0.11
HIPK3-202ENST00000379016 STIM1Q13586 685 aa15.75■□□□□ 0.11
HIPK3-202ENST00000379016 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
HIPK3-202ENST00000379016 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.119e-6■■■■□ 22.2
HIPK3-202ENST00000379016 CTNNBL1Q8WYA6 563 aaPredicted RBP15.75■□□□□ 0.11
HIPK3-202ENST00000379016 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
HIPK3-202ENST00000379016 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
HIPK3-202ENST00000379016 APBB1IPQ7Z5R6 666 aaPredicted RBP15.74■□□□□ 0.11
HIPK3-202ENST00000379016 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
HIPK3-202ENST00000379016 PIBF1Q8WXW3 757 aa15.74■□□□□ 0.11
HIPK3-202ENST00000379016 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
HIPK3-202ENST00000379016 PSME1Q06323 249 aa15.73■□□□□ 0.11
HIPK3-202ENST00000379016 FKBP5Q13451 457 aaPredicted RBP15.73■□□□□ 0.11
HIPK3-202ENST00000379016 FEZ1Q99689 392 aa15.73■□□□□ 0.11
HIPK3-202ENST00000379016 CCP110O43303 1012 aa15.73■□□□□ 0.11
HIPK3-202ENST00000379016 BBXQ8WY36 941 aaPredicted RBP15.73■□□□□ 0.11
HIPK3-202ENST00000379016 KIAA1328Q86T90 577 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 DZIP1Q86YF9 867 aaKnown RBP15.72■□□□□ 0.11
HIPK3-202ENST00000379016 TBC1D2BQ9UPU7 963 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 GSTTP1A0A1W2PQM5 241 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 USP8P40818 1118 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
HIPK3-202ENST00000379016 NASPP49321 788 aaPredicted RBP15.71■□□□□ 0.11
HIPK3-202ENST00000379016 MACROD2A1Z1Q3 448 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 POTEJP0CG39 1038 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 MPNDQ8N594 471 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 GPATCH11Q8N954 259 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 FERP16591 822 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
HIPK3-202ENST00000379016 DNAI2Q9GZS0 605 aa15.71■□□□□ 0.1
HIPK3-202ENST00000379016 ERC2O15083 957 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 COG3Q96JB2 828 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 E9PSI1 815 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 TNNT1P13805 278 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
HIPK3-202ENST00000379016 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
HIPK3-202ENST00000379016 USP5P45974 858 aa15.69■□□□□ 0.1
HIPK3-202ENST00000379016 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
HIPK3-202ENST00000379016 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
HIPK3-202ENST00000379016 ERLIN1O75477 346 aa15.69■□□□□ 0.1
HIPK3-202ENST00000379016 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
HIPK3-202ENST00000379016 ZNF354CQ86Y25 554 aa15.68■□□□□ 0.1
HIPK3-202ENST00000379016 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
HIPK3-202ENST00000379016 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
HIPK3-202ENST00000379016 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
HIPK3-202ENST00000379016 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
HIPK3-202ENST00000379016 RAB3IL1Q8TBN0 382 aa15.68■□□□□ 0.1
HIPK3-202ENST00000379016 NUP133Q8WUM0 1156 aa15.68■□□□□ 0.1
HIPK3-202ENST00000379016 CCDC160A6NGH7 325 aa15.68■□□□□ 0.1
HIPK3-202ENST00000379016 HOOK3Q86VS8 718 aa15.68■□□□□ 0.1
HIPK3-202ENST00000379016 TXLNBQ8N3L3 684 aa15.67■□□□□ 0.1
HIPK3-202ENST00000379016 TAF4BQ92750 862 aa15.67■□□□□ 0.1
HIPK3-202ENST00000379016 CETN2P41208 172 aa15.67■□□□□ 0.1
HIPK3-202ENST00000379016 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
HIPK3-202ENST00000379016 DNA2P51530 1060 aa15.67■□□□□ 0.1
HIPK3-202ENST00000379016 STK3Q13188 491 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 TMCO4Q5TGY1 634 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
HIPK3-202ENST00000379016 SH3BP5O60239 455 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
HIPK3-202ENST00000379016 STK38Q15208 465 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 DAAM2Q86T65 1068 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 LIG1P18858 919 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 PSMA5P28066 241 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 NUCB2P80303 420 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 ZKSCAN2Q63HK3 967 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 KIF6Q6ZMV9 814 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 CTNNA2P26232 953 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
HIPK3-202ENST00000379016 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 CAVIN1Q6NZI2 390 aaKnown RBP15.65■□□□□ 0.1
HIPK3-202ENST00000379016 TTLL12Q14166 644 aaPredicted RBP15.65■□□□□ 0.1
HIPK3-202ENST00000379016 IQCEQ6IPM2 695 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 TMCO3Q6UWJ1 677 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 TTC36A6NLP5 189 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 IFFO1Q0D2I5 559 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
HIPK3-202ENST00000379016 FERMT2Q96AC1 680 aa15.65■□□□□ 0.1
HIPK3-202ENST00000379016 NINLQ9Y2I6 1382 aa15.64■□□□□ 0.09
HIPK3-202ENST00000379016 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
HIPK3-202ENST00000379016 NUP155O75694 1391 aa15.64■□□□□ 0.09
HIPK3-202ENST00000379016 CCDC69A6NI79 296 aa15.63■□□□□ 0.09
HIPK3-202ENST00000379016 LMAN1P49257 510 aa15.63■□□□□ 0.09
HIPK3-202ENST00000379016 BMP2KQ9NSY1 1161 aaPredicted RBP15.63■□□□□ 0.09
HIPK3-202ENST00000379016 PSMC4P43686 418 aa15.63■□□□□ 0.09
HIPK3-202ENST00000379016 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
HIPK3-202ENST00000379016 CNTROBQ8N137 903 aa15.63■□□□□ 0.09
HIPK3-202ENST00000379016 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
HIPK3-202ENST00000379016 TSPY26PQ9H489 355 aa15.63■□□□□ 0.09
HIPK3-202ENST00000379016 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
HIPK3-202ENST00000379016 PPP4R3AQ6IN85 833 aa15.62■□□□□ 0.09
HIPK3-202ENST00000379016 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
HIPK3-202ENST00000379016 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
HIPK3-202ENST00000379016 CFAP58Q5T655 872 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms