RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 CABP4P57796 275 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 NACAP1Q9BZK3 213 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 TXLNAP40222 546 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 GNAI2P04899 355 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 SETQ01105 290 aaPredicted RBP13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
PHACTR4-202ENST00000373839 TWISTNBQ3B726 338 aaPredicted RBP13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 RTEL1-TNFRSF6BF6WH68 1400 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 OFD1O75665 1012 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 EPS15P42566 896 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 FYB1O15117 783 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
PHACTR4-202ENST00000373839 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
PHACTR4-202ENST00000373839 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 LETM1O95202 739 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 TTC39AQ5SRH9 613 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 KCNH5Q8NCM2 988 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
PHACTR4-202ENST00000373839 DAPK1P53355 1430 aa13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-202ENST00000373839 GSE1Q14687 1217 aa13.27□□□□□ -0.28
PHACTR4-202ENST00000373839 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.28
PHACTR4-202ENST00000373839 SDF4Q9BRK5 362 aa13.27□□□□□ -0.28
PHACTR4-202ENST00000373839 ANKRD1Q15327 319 aa13.27□□□□□ -0.29
PHACTR4-202ENST00000373839 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
PHACTR4-202ENST00000373839 DNAJC2Q99543 621 aaKnown RBP13.27□□□□□ -0.29
PHACTR4-202ENST00000373839 MBD3O95983 291 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 WDR63Q8IWG1 891 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 HECW1Q76N89 1606 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 MPHOSPH8Q99549 860 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 RABEP1Q15276 862 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
PHACTR4-202ENST00000373839 RUFY1Q96T51 708 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 NAP1L1P55209 391 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 CABP1Q9NZU7 370 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 FILIP1LQ4L180 1135 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 AK7Q96M32 723 aa13.25□□□□□ -0.29
PHACTR4-202ENST00000373839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■■ 73.7
PHACTR4-202ENST00000373839 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
PHACTR4-202ENST00000373839 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-202ENST00000373839 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-202ENST00000373839 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
PHACTR4-202ENST00000373839 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
PHACTR4-202ENST00000373839 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 CCP110O43303 1012 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 MAGEC2Q9UBF1 373 aaPredicted RBP13.23□□□□□ -0.29
PHACTR4-202ENST00000373839 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 MNS1Q8NEH6 495 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 SOGA3Q5TF21 947 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 CDKL5O76039 1030 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 FCHSD2O94868 740 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 STARD3NLO95772 234 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
PHACTR4-202ENST00000373839 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.29
PHACTR4-202ENST00000373839 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
PHACTR4-202ENST00000373839 SYCP1Q15431 976 aa13.21□□□□□ -0.29
PHACTR4-202ENST00000373839 TMOD2Q9NZR1 351 aa13.21□□□□□ -0.29
PHACTR4-202ENST00000373839 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms