RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 L3MBTL2Q969R5 705 aa14.66□□□□□ -0.06
COL5A1-202ENST00000371820 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
COL5A1-202ENST00000371820 GPRASP1Q5JY77 1395 aa14.65□□□□□ -0.06
COL5A1-202ENST00000371820 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
COL5A1-202ENST00000371820 NEUROD1Q13562 356 aa14.65□□□□□ -0.06
COL5A1-202ENST00000371820 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
COL5A1-202ENST00000371820 ATP7BP35670 1465 aa14.64□□□□□ -0.07
COL5A1-202ENST00000371820 COL14A1Q05707 1796 aaKnown RBP14.64□□□□□ -0.07
COL5A1-202ENST00000371820 TRPM1Q7Z4N2 1603 aa14.63□□□□□ -0.07
COL5A1-202ENST00000371820 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
COL5A1-202ENST00000371820 SEPT12Q8IYM1 358 aa14.63□□□□□ -0.07
COL5A1-202ENST00000371820 ONECUT3O60422 494 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-202ENST00000371820 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
COL5A1-202ENST00000371820 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
COL5A1-202ENST00000371820 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
COL5A1-202ENST00000371820 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
COL5A1-202ENST00000371820 CCDC9Q9Y3X0 531 aaKnown RBP14.61□□□□□ -0.07
COL5A1-202ENST00000371820 TOPAZ1Q8N9V7 1692 aa14.61□□□□□ -0.07
COL5A1-202ENST00000371820 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
COL5A1-202ENST00000371820 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
COL5A1-202ENST00000371820 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
COL5A1-202ENST00000371820 QRICH2Q9H0J4 1663 aa14.59□□□□□ -0.07
COL5A1-202ENST00000371820 NUDT16Q96DE0 195 aaKnown RBP14.59□□□□□ -0.07
COL5A1-202ENST00000371820 CDK19Q9BWU1 502 aa14.59□□□□□ -0.07
COL5A1-202ENST00000371820 BTG4Q9NY30 223 aa14.59□□□□□ -0.07
COL5A1-202ENST00000371820 PHRF1Q9P1Y6 1649 aaKnown RBP14.59□□□□□ -0.07
COL5A1-202ENST00000371820 KRT27Q7Z3Y8 459 aa14.58□□□□□ -0.08
COL5A1-202ENST00000371820 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
COL5A1-202ENST00000371820 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
COL5A1-202ENST00000371820 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
COL5A1-202ENST00000371820 THSD7AQ9UPZ6 1657 aa14.57□□□□□ -0.08
COL5A1-202ENST00000371820 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-202ENST00000371820 SRPK2P78362 688 aaKnown RBP14.56□□□□□ -0.08
COL5A1-202ENST00000371820 POLR3AO14802 1390 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-202ENST00000371820 A0A0G2JS52 829 aa14.55□□□□□ -0.08
COL5A1-202ENST00000371820 MYT1Q01538 1121 aa14.55□□□□□ -0.08
COL5A1-202ENST00000371820 SF3B2Q13435 895 aaKnown RBP14.55□□□□□ -0.08
COL5A1-202ENST00000371820 FAM98CQ17RN3 349 aaKnown RBP14.55□□□□□ -0.08
COL5A1-202ENST00000371820 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
COL5A1-202ENST00000371820 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
COL5A1-202ENST00000371820 PRDM11Q9NQV5 511 aa14.54□□□□□ -0.08
COL5A1-202ENST00000371820 RGPD1P0DJD0 1748 aa14.53□□□□□ -0.08
COL5A1-202ENST00000371820 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
COL5A1-202ENST00000371820 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
COL5A1-202ENST00000371820 EVC2Q86UK5 1308 aa14.53□□□□□ -0.08
COL5A1-202ENST00000371820 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
COL5A1-202ENST00000371820 ACEP12821 1306 aa14.52□□□□□ -0.08
COL5A1-202ENST00000371820 PPIP5K1Q6PFW1 1433 aa14.51□□□□□ -0.09
COL5A1-202ENST00000371820 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-202ENST00000371820 TNS1Q9HBL0 1735 aaKnown RBP14.5□□□□□ -0.09
COL5A1-202ENST00000371820 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
COL5A1-202ENST00000371820 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
COL5A1-202ENST00000371820 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
COL5A1-202ENST00000371820 LRP5O75197 1615 aa14.5□□□□□ -0.09
COL5A1-202ENST00000371820 SBNO2Q9Y2G9 1366 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 BAG6P46379 1132 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 CHRNA2Q15822 529 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 LMO7Q8WWI1 1683 aa14.49□□□□□ -0.09
COL5A1-202ENST00000371820 USP19O94966 1318 aa14.48□□□□□ -0.09
COL5A1-202ENST00000371820 NUTM2GQ5VZR2 741 aa14.48□□□□□ -0.09
COL5A1-202ENST00000371820 CPDO75976 1380 aa14.47□□□□□ -0.09
COL5A1-202ENST00000371820 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
COL5A1-202ENST00000371820 FAM182BQ5T319 152 aa14.47□□□□□ -0.09
COL5A1-202ENST00000371820 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
COL5A1-202ENST00000371820 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.09
COL5A1-202ENST00000371820 STRN4Q9NRL3 753 aa14.46□□□□□ -0.09
COL5A1-202ENST00000371820 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
COL5A1-202ENST00000371820 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
COL5A1-202ENST00000371820 ABTB2Q8N961 1025 aa14.45□□□□□ -0.1
COL5A1-202ENST00000371820 USP6P35125 1406 aa14.44□□□□□ -0.1
COL5A1-202ENST00000371820 NLRP13Q86W25 1043 aa14.44□□□□□ -0.1
COL5A1-202ENST00000371820 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-202ENST00000371820 CABP1Q9NZU7 370 aa14.44□□□□□ -0.1
COL5A1-202ENST00000371820 EN1Q05925 392 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-202ENST00000371820 BARGINQ6ZT62 677 aa14.43□□□□□ -0.1
COL5A1-202ENST00000371820 SLIT3O75094 1523 aa14.42□□□□□ -0.1
COL5A1-202ENST00000371820 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-202ENST00000371820 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-202ENST00000371820 EVA1CP58658 441 aa14.41□□□□□ -0.1
COL5A1-202ENST00000371820 LARP1Q6PKG0 1096 aaKnown RBP14.41□□□□□ -0.1
COL5A1-202ENST00000371820 FAM196AQ6ZSG2 479 aa14.41□□□□□ -0.1
COL5A1-202ENST00000371820 MIER1Q8N108 512 aa14.41□□□□□ -0.1
COL5A1-202ENST00000371820 USP35Q9P2H5 1018 aa14.41□□□□□ -0.1
COL5A1-202ENST00000371820 AKAP12Q02952 1782 aa14.41□□□□□ -0.1
COL5A1-202ENST00000371820 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
COL5A1-202ENST00000371820 PIK3C2AO00443 1686 aa14.4□□□□□ -0.1
COL5A1-202ENST00000371820 GCP02774 474 aa14.4□□□□□ -0.1
COL5A1-202ENST00000371820 RREB1Q92766 1687 aa14.39□□□□□ -0.11
COL5A1-202ENST00000371820 PARD3Q8TEW0 1356 aa14.39□□□□□ -0.11
COL5A1-202ENST00000371820 TRIM37O94972 964 aa14.39□□□□□ -0.11
COL5A1-202ENST00000371820 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
COL5A1-202ENST00000371820 PUS7Q96PZ0 661 aaKnown RBP14.39□□□□□ -0.11
COL5A1-202ENST00000371820 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
COL5A1-202ENST00000371820 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
COL5A1-202ENST00000371820 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
COL5A1-202ENST00000371820 THRAP3Q9Y2W1 955 aaKnown RBP14.38□□□□□ -0.11
COL5A1-202ENST00000371820 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
COL5A1-202ENST00000371820 NLRP6P59044 892 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms