RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KCNH2Q12809 1159 aa10.27□□□□□ -0.77
RNU4-28P-201ENST00000364739 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
RNU4-28P-201ENST00000364739 FOXC1Q12948 553 aa10.26□□□□□ -0.77
RNU4-28P-201ENST00000364739 TRIM32Q13049 653 aa10.26□□□□□ -0.77
RNU4-28P-201ENST00000364739 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
RNU4-28P-201ENST00000364739 UNC93B1Q9H1C4 597 aa10.25□□□□□ -0.77
RNU4-28P-201ENST00000364739 POTECB2RU33 542 aa10.24□□□□□ -0.77
RNU4-28P-201ENST00000364739 F12P00748 615 aaPredicted RBP10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 SKOR1P84550 965 aa10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 BAP1Q92560 729 aa10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
RNU4-28P-201ENST00000364739 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.77
RNU4-28P-201ENST00000364739 EPS8L1Q8TE68 723 aa10.2□□□□□ -0.78
RNU4-28P-201ENST00000364739 ST8SIA5O15466 376 aa10.19□□□□□ -0.78
RNU4-28P-201ENST00000364739 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
RNU4-28P-201ENST00000364739 SH3BP2P78314 561 aa10.19□□□□□ -0.78
RNU4-28P-201ENST00000364739 NR6A1Q15406 480 aa10.19□□□□□ -0.78
RNU4-28P-201ENST00000364739 HMX1Q9NP08 348 aaPredicted RBP10.19□□□□□ -0.78
RNU4-28P-201ENST00000364739 RC3H1Q5TC82 1133 aaKnown RBP10.18□□□□□ -0.78
RNU4-28P-201ENST00000364739 AVPP01185 164 aa10.17□□□□□ -0.78
RNU4-28P-201ENST00000364739 TOR4AQ9NXH8 423 aa10.17□□□□□ -0.78
RNU4-28P-201ENST00000364739 TMEM259Q4ZIN3 620 aa10.16□□□□□ -0.78
RNU4-28P-201ENST00000364739 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
RNU4-28P-201ENST00000364739 MRGPRX2Q96LB1 330 aa10.16□□□□□ -0.78
RNU4-28P-201ENST00000364739 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
RNU4-28P-201ENST00000364739 FOXJ1Q92949 421 aa10.15□□□□□ -0.78
RNU4-28P-201ENST00000364739 WNT7AO00755 349 aa10.14□□□□□ -0.79
RNU4-28P-201ENST00000364739 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
RNU4-28P-201ENST00000364739 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
RNU4-28P-201ENST00000364739 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
RNU4-28P-201ENST00000364739 WNT7BP56706 349 aa10.13□□□□□ -0.79
RNU4-28P-201ENST00000364739 CYP4X1Q8N118 509 aa10.13□□□□□ -0.79
RNU4-28P-201ENST00000364739 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
RNU4-28P-201ENST00000364739 AXIN1O15169 862 aa10.11□□□□□ -0.79
RNU4-28P-201ENST00000364739 SMCPP49901 116 aaPredicted RBP10.11□□□□□ -0.79
RNU4-28P-201ENST00000364739 AGERQ15109 404 aa10.1□□□□□ -0.79
RNU4-28P-201ENST00000364739 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
RNU4-28P-201ENST00000364739 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
RNU4-28P-201ENST00000364739 TTC24A2A3L6 582 aaPredicted RBP10.09□□□□□ -0.79
RNU4-28P-201ENST00000364739 J3QL48 77 aa10.09□□□□□ -0.79
RNU4-28P-201ENST00000364739 TMEM132AQ24JP5 1023 aa10.09□□□□□ -0.79
RNU4-28P-201ENST00000364739 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
RNU4-28P-201ENST00000364739 SIAH2O43255 324 aa10.08□□□□□ -0.8
RNU4-28P-201ENST00000364739 GJD4Q96KN9 370 aaPredicted RBP10.08□□□□□ -0.8
RNU4-28P-201ENST00000364739 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
RNU4-28P-201ENST00000364739 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
RNU4-28P-201ENST00000364739 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
RNU4-28P-201ENST00000364739 ARMC2Q8NEN0 867 aa10.07□□□□□ -0.8
RNU4-28P-201ENST00000364739 SNIP1Q8TAD8 396 aaKnown RBP10.07□□□□□ -0.8
RNU4-28P-201ENST00000364739 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
RNU4-28P-201ENST00000364739 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
RNU4-28P-201ENST00000364739 CARD14Q9BXL6 1004 aa10.06□□□□□ -0.8
RNU4-28P-201ENST00000364739 GMPR2Q9P2T1 348 aaKnown RBP10.06□□□□□ -0.8
RNU4-28P-201ENST00000364739 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
RNU4-28P-201ENST00000364739 C11orf95C9JLR9 678 aaPredicted RBP10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 SMPD1P17405 629 aa10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 BPHLQ86WA6 291 aaPredicted RBP10.04□□□□□ -0.8
RNU4-28P-201ENST00000364739 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
RNU4-28P-201ENST00000364739 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
RNU4-28P-201ENST00000364739 WFS1O76024 890 aa10.02□□□□□ -0.81
RNU4-28P-201ENST00000364739 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
RNU4-28P-201ENST00000364739 FAM174AQ8TBP5 190 aa10.01□□□□□ -0.81
RNU4-28P-201ENST00000364739 HPS1Q92902 700 aa10.01□□□□□ -0.81
RNU4-28P-201ENST00000364739 ARHGAP9Q9BRR9 750 aa10.01□□□□□ -0.81
RNU4-28P-201ENST00000364739 GPKOWQ92917 476 aaPredicted RBP eCLIP9.99□□□□□ -0.81
RNU4-28P-201ENST00000364739 GPR37L1O60883 481 aa9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 NFX1Q12986 1120 aaKnown RBP9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
RNU4-28P-201ENST00000364739 WIPF1O43516 503 aa9.97□□□□□ -0.81
RNU4-28P-201ENST00000364739 PTK2Q05397 1052 aa9.97□□□□□ -0.81
RNU4-28P-201ENST00000364739 ADAM32Q8TC27 787 aa9.97□□□□□ -0.81
RNU4-28P-201ENST00000364739 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
RNU4-28P-201ENST00000364739 MCM6Q14566 821 aa9.96□□□□□ -0.82
RNU4-28P-201ENST00000364739 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
RNU4-28P-201ENST00000364739 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.82
RNU4-28P-201ENST00000364739 GRM5P41594 1212 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 CDK15Q96Q40 435 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 SENP2Q9HC62 589 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
RNU4-28P-201ENST00000364739 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
RNU4-28P-201ENST00000364739 STK17AQ9UEE5 414 aa9.94□□□□□ -0.82
RNU4-28P-201ENST00000364739 INSM1Q01101 510 aaPredicted RBP9.93□□□□□ -0.82
RNU4-28P-201ENST00000364739 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
RNU4-28P-201ENST00000364739 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
RNU4-28P-201ENST00000364739 ADH1CP00326 375 aa9.92□□□□□ -0.82
RNU4-28P-201ENST00000364739 NR3C2P08235 984 aa9.92□□□□□ -0.82
RNU4-28P-201ENST00000364739 NNTQ13423 1086 aa9.92□□□□□ -0.82
RNU4-28P-201ENST00000364739 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
RNU4-28P-201ENST00000364739 MPNDQ8N594 471 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms