RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TREML4Q6UXN2 200 aa6.24□□□□□ -1.41
RNU4-42P-201ENST00000364738 TSC1Q92574 1164 aa6.24□□□□□ -1.41
RNU4-42P-201ENST00000364738 TRIM47Q96LD4 638 aa6.24□□□□□ -1.41
RNU4-42P-201ENST00000364738 MAP10Q9P2G4 905 aa6.24□□□□□ -1.41
RNU4-42P-201ENST00000364738 SNRPBP14678 240 aaKnown RBP6.23□□□□□ -1.41
RNU4-42P-201ENST00000364738 LIMD1Q9UGP4 676 aa6.23□□□□□ -1.41
RNU4-42P-201ENST00000364738 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 CAPN5O15484 640 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 F12P00748 615 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 VARSP26640 1264 aaKnown RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 QPCTQ16769 361 aa6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 KIFC2Q96AC6 838 aa6.22□□□□□ -1.41
RNU4-42P-201ENST00000364738 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
RNU4-42P-201ENST00000364738 PER1O15534 1290 aaPredicted RBP6.21□□□□□ -1.42
RNU4-42P-201ENST00000364738 WFS1O76024 890 aa6.21□□□□□ -1.42
RNU4-42P-201ENST00000364738 BMP1P13497 986 aa6.21□□□□□ -1.42
RNU4-42P-201ENST00000364738 CLK2P49760 499 aaKnown RBP6.2□□□□□ -1.42
RNU4-42P-201ENST00000364738 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
RNU4-42P-201ENST00000364738 FAM174AQ8TBP5 190 aa6.2□□□□□ -1.42
RNU4-42P-201ENST00000364738 LILRB3O75022 631 aa6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 NNTQ13423 1086 aa6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 AGERQ15109 404 aa6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 TUSC1Q2TAM9 212 aa6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 HELBQ8NG08 1087 aaPredicted RBP6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 FOXJ1Q92949 421 aa6.19□□□□□ -1.42
RNU4-42P-201ENST00000364738 NFX1Q12986 1120 aaKnown RBP6.18□□□□□ -1.42
RNU4-42P-201ENST00000364738 ARID5BQ14865 1188 aa6.18□□□□□ -1.42
RNU4-42P-201ENST00000364738 TRIM46Q7Z4K8 759 aa6.18□□□□□ -1.42
RNU4-42P-201ENST00000364738 MPNDQ8N594 471 aa6.18□□□□□ -1.42
RNU4-42P-201ENST00000364738 ADH1CP00326 375 aa6.17□□□□□ -1.42
RNU4-42P-201ENST00000364738 BPHLQ86WA6 291 aaPredicted RBP6.17□□□□□ -1.42
RNU4-42P-201ENST00000364738 RSPH6AQ9H0K4 717 aa6.17□□□□□ -1.42
RNU4-42P-201ENST00000364738 POLR3EQ9NVU0 708 aa6.17□□□□□ -1.42
RNU4-42P-201ENST00000364738 TERTO14746 1132 aaKnown RBP6.16□□□□□ -1.42
RNU4-42P-201ENST00000364738 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
RNU4-42P-201ENST00000364738 RTL5Q5HYW3 569 aaPredicted RBP6.16□□□□□ -1.42
RNU4-42P-201ENST00000364738 ARMC2Q8NEN0 867 aa6.16□□□□□ -1.42
RNU4-42P-201ENST00000364738 TIMP2P16035 220 aa6.15□□□□□ -1.42
RNU4-42P-201ENST00000364738 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
RNU4-42P-201ENST00000364738 NBPF14Q5TI25 921 aa6.15□□□□□ -1.42
RNU4-42P-201ENST00000364738 CDK15Q96Q40 435 aa6.15□□□□□ -1.42
RNU4-42P-201ENST00000364738 ZFP42Q96MM3 310 aa6.14□□□□□ -1.43
RNU4-42P-201ENST00000364738 MAGEB6P1A0A0J9YX57 407 aa6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 NR5A1Q13285 461 aa6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 SCARF1Q14162 830 aa6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 MRPL14Q6P1L8 145 aaKnown RBP6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 BCANQ96GW7 911 aa6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 KDM4CQ9H3R0 1056 aa6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 GPBP1L1Q9HC44 474 aaPredicted RBP6.13□□□□□ -1.43
RNU4-42P-201ENST00000364738 WIPF1O43516 503 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 ZIC2O95409 532 aaPredicted RBP6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 NR3C2P08235 984 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 FSHRP23945 695 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 ITPKCQ96DU7 683 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 PURBQ96QR8 312 aaKnown RBP6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 C1QTNF2Q9BXJ5 285 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 KLF16Q9BXK1 252 aaPredicted RBP6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 ZFAND3Q9H8U3 227 aa6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 NXF1Q9UBU9 619 aaKnown RBP6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 ATP1B4Q9UN42 357 aaPredicted RBP6.12□□□□□ -1.43
RNU4-42P-201ENST00000364738 SKIV2LQ15477 1246 aaKnown RBP6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 SH3D19Q5HYK7 790 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 SH3BP5LQ7L8J4 393 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 SH3RF1Q7Z6J0 888 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 SLC16A10Q8TF71 515 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 DDRGK1Q96HY6 314 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 CARD14Q9BXL6 1004 aa6.11□□□□□ -1.43
RNU4-42P-201ENST00000364738 GRM5P41594 1212 aa6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 INSM1Q01101 510 aaPredicted RBP6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 CTDSPL2Q05D32 466 aa6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 VASH1Q7L8A9 365 aaPredicted RBP6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 GPKOWQ92917 476 aaPredicted RBP eCLIP6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 FAM117AQ9C073 453 aa6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 MAP4K5Q9Y4K4 846 aa6.1□□□□□ -1.43
RNU4-42P-201ENST00000364738 VEGFBP49765 207 aa6.09□□□□□ -1.43
RNU4-42P-201ENST00000364738 C6orf118Q5T5N4 469 aa6.09□□□□□ -1.43
RNU4-42P-201ENST00000364738 TRMT44Q8IYL2 757 aaKnown RBP6.09□□□□□ -1.43
RNU4-42P-201ENST00000364738 PROCA1Q8NCQ7 364 aaPredicted RBP6.09□□□□□ -1.43
RNU4-42P-201ENST00000364738 LRRN4Q8WUT4 740 aa6.09□□□□□ -1.43
RNU4-42P-201ENST00000364738 UPP2O95045 317 aa6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 NPAS3Q8IXF0 933 aa6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 IRF7Q92985 503 aa6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 FKBPLQ9UIM3 349 aa6.08□□□□□ -1.44
RNU4-42P-201ENST00000364738 SOBPA7XYQ1 873 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 H3BM21 787 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 BMP2P12643 396 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 ERFEQ4G0M1 354 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 FBXO31Q5XUX0 539 aaPredicted RBP6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 MEIOBQ8N635 442 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 EMILIN1Q9Y6C2 1016 aa6.07□□□□□ -1.44
RNU4-42P-201ENST00000364738 MAN1A2O60476 641 aa6.06□□□□□ -1.44
RNU4-42P-201ENST00000364738 AP1G2O75843 785 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms