RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 NCOA3Q9Y6Q9 1424 aa28.13■■■□□ 2.09
MAP1LC3A-201ENST00000360668 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
MAP1LC3A-201ENST00000360668 C14orf37Q86TY3 774 aa28.11■■■□□ 2.09
MAP1LC3A-201ENST00000360668 SCAF1Q9H7N4 1312 aaKnown RBP28.11■■■□□ 2.09
MAP1LC3A-201ENST00000360668 TOM1O60784 492 aa28.1■■■□□ 2.09
MAP1LC3A-201ENST00000360668 SSH2Q76I76 1423 aa28.09■■■□□ 2.09
MAP1LC3A-201ENST00000360668 PMFBP1Q8TBY8 1022 aa28.08■■■□□ 2.09
MAP1LC3A-201ENST00000360668 ZBED9Q6R2W3 1325 aa28.08■■■□□ 2.09
MAP1LC3A-201ENST00000360668 TTC21BQ7Z4L5 1316 aa28.08■■■□□ 2.09
MAP1LC3A-201ENST00000360668 WDR43Q15061 677 aaKnown RBP eCLIP28.07■■■□□ 2.08
MAP1LC3A-201ENST00000360668 NGDNQ8NEJ9 315 aaKnown RBP28.07■■■□□ 2.08
MAP1LC3A-201ENST00000360668 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
MAP1LC3A-201ENST00000360668 MTHFSP49914 203 aa28.07■■■□□ 2.08
MAP1LC3A-201ENST00000360668 NME9Q86XW9 330 aa28.07■■■□□ 2.08
MAP1LC3A-201ENST00000360668 C19orf44Q9H6X5 657 aa28.06■■■□□ 2.08
MAP1LC3A-201ENST00000360668 TMEM94Q12767 1356 aa28.04■■■□□ 2.08
MAP1LC3A-201ENST00000360668 TTC21AQ8NDW8 1320 aa28.04■■■□□ 2.08
MAP1LC3A-201ENST00000360668 CFAP53Q96M91 514 aa28.04■■■□□ 2.08
MAP1LC3A-201ENST00000360668 DCCP43146 1447 aa28.03■■■□□ 2.08
MAP1LC3A-201ENST00000360668 COG3Q96JB2 828 aa28.03■■■□□ 2.08
MAP1LC3A-201ENST00000360668 ADAMTS8Q9UP79 889 aa28.03■■■□□ 2.08
MAP1LC3A-201ENST00000360668 PHF8Q9UPP1 1060 aa28.03■■■□□ 2.08
MAP1LC3A-201ENST00000360668 GTF3C3Q9Y5Q9 886 aa28.03■■■□□ 2.08
MAP1LC3A-201ENST00000360668 PIP4K2BP78356 416 aa28.02■■■□□ 2.08
MAP1LC3A-201ENST00000360668 SHPRHQ149N8 1683 aa28■■■□□ 2.07
MAP1LC3A-201ENST00000360668 AATKQ6ZMQ8 1374 aa28■■■□□ 2.07
MAP1LC3A-201ENST00000360668 OVOS2A0A0J9YW53 1432 aa27.98■■■□□ 2.07
MAP1LC3A-201ENST00000360668 OVOS2Q6IE36 1432 aa27.98■■■□□ 2.07
MAP1LC3A-201ENST00000360668 ZRANB1Q9UGI0 708 aa27.98■■■□□ 2.07
MAP1LC3A-201ENST00000360668 ESCO1Q5FWF5 840 aa27.96■■■□□ 2.07
MAP1LC3A-201ENST00000360668 C1orf167Q5SNV9 1468 aa27.95■■■□□ 2.06
MAP1LC3A-201ENST00000360668 USP31Q70CQ4 1352 aa27.95■■■□□ 2.06
MAP1LC3A-201ENST00000360668 PNPLA6Q8IY17 1366 aa27.95■■■□□ 2.06
MAP1LC3A-201ENST00000360668 XIRP1Q702N8 1843 aaKnown RBP27.94■■■□□ 2.06
MAP1LC3A-201ENST00000360668 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
MAP1LC3A-201ENST00000360668 COL3A1P02461 1466 aaPredicted RBP27.94■■■□□ 2.06
MAP1LC3A-201ENST00000360668 MAP2P11137 1827 aaKnown RBP27.94■■■□□ 2.06
MAP1LC3A-201ENST00000360668 ATF3P18847 181 aa27.94■■■□□ 2.06
MAP1LC3A-201ENST00000360668 KIF1AQ12756 1690 aa27.93■■■□□ 2.06
MAP1LC3A-201ENST00000360668 POLKQ9UBT6 870 aa27.93■■■□□ 2.06
MAP1LC3A-201ENST00000360668 PIK3C2AO00443 1686 aa27.92■■■□□ 2.06
MAP1LC3A-201ENST00000360668 MSH6P52701 1360 aa27.92■■■□□ 2.06
MAP1LC3A-201ENST00000360668 MST1RQ04912 1400 aa27.91■■■□□ 2.06
MAP1LC3A-201ENST00000360668 USP54Q70EL1 1684 aa27.91■■■□□ 2.06
MAP1LC3A-201ENST00000360668 CADPS2Q86UW7 1296 aa27.9■■■□□ 2.06
MAP1LC3A-201ENST00000360668 ORAI2Q96SN7 254 aa27.89■■■□□ 2.05
MAP1LC3A-201ENST00000360668 CDK12Q9NYV4 1490 aaPredicted RBP27.88■■■□□ 2.05
MAP1LC3A-201ENST00000360668 HSPA1LP34931 641 aa27.87■■■□□ 2.05
MAP1LC3A-201ENST00000360668 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
MAP1LC3A-201ENST00000360668 PSME1Q06323 249 aa27.86■■■□□ 2.05
MAP1LC3A-201ENST00000360668 FBLN1P23142 703 aa27.86■■■□□ 2.05
MAP1LC3A-201ENST00000360668 EMILIN1Q9Y6C2 1016 aa27.84■■■□□ 2.05
MAP1LC3A-201ENST00000360668 DIAPH1O60610 1272 aaKnown RBP27.83■■■□□ 2.05
MAP1LC3A-201ENST00000360668 MARF1Q9Y4F3 1742 aaKnown RBP27.82■■■□□ 2.04
MAP1LC3A-201ENST00000360668 PAK3O75914 559 aaPredicted RBP27.82■■■□□ 2.04
MAP1LC3A-201ENST00000360668 PPM1GO15355 546 aaPredicted RBP27.81■■■□□ 2.04
MAP1LC3A-201ENST00000360668 NLRP6P59044 892 aa27.81■■■□□ 2.04
MAP1LC3A-201ENST00000360668 ABTB2Q8N961 1025 aa27.81■■■□□ 2.04
MAP1LC3A-201ENST00000360668 FOXO3O43524 673 aa27.8■■■□□ 2.04
MAP1LC3A-201ENST00000360668 RRS1Q15050 365 aaKnown RBP27.8■■■□□ 2.04
MAP1LC3A-201ENST00000360668 CCDC146Q8IYE0 955 aa27.8■■■□□ 2.04
MAP1LC3A-201ENST00000360668 SENP3-EIF4A1A0A087X0R7 540 aa27.79■■■□□ 2.04
MAP1LC3A-201ENST00000360668 U2AF1L5P0DN76 240 aaPredicted RBP27.79■■■□□ 2.04
MAP1LC3A-201ENST00000360668 U2AF1Q01081 240 aaKnown RBP eCLIP27.79■■■□□ 2.04
MAP1LC3A-201ENST00000360668 PDE3BQ13370 1112 aa27.79■■■□□ 2.04
MAP1LC3A-201ENST00000360668 NGEFQ8N5V2 710 aa27.79■■■□□ 2.04
MAP1LC3A-201ENST00000360668 RUNDC1Q96C34 613 aa27.78■■■□□ 2.04
MAP1LC3A-201ENST00000360668 TRPM3Q9HCF6 1732 aaPredicted RBP27.78■■■□□ 2.04
MAP1LC3A-201ENST00000360668 SLAIN2Q9P270 581 aa27.77■■■□□ 2.04
MAP1LC3A-201ENST00000360668 SALL2Q9Y467 1007 aaPredicted RBP27.76■■■□□ 2.03
MAP1LC3A-201ENST00000360668 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
MAP1LC3A-201ENST00000360668 KRT28Q7Z3Y7 464 aa27.75■■■□□ 2.03
MAP1LC3A-201ENST00000360668 APAF1O14727 1248 aa27.74■■■□□ 2.03
MAP1LC3A-201ENST00000360668 PEAK1Q9H792 1746 aa27.73■■■□□ 2.03
MAP1LC3A-201ENST00000360668 IL13P35225 146 aa27.73■■■□□ 2.03
MAP1LC3A-201ENST00000360668 NUTM2GQ5VZR2 741 aa27.72■■■□□ 2.03
MAP1LC3A-201ENST00000360668 SBNO1A3KN83 1393 aa27.71■■■□□ 2.03
MAP1LC3A-201ENST00000360668 KIF24Q5T7B8 1368 aa27.71■■■□□ 2.03
MAP1LC3A-201ENST00000360668 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
MAP1LC3A-201ENST00000360668 MAP3K19Q56UN5 1328 aa27.71■■■□□ 2.03
MAP1LC3A-201ENST00000360668 NPHP3Q7Z494 1330 aa27.7■■■□□ 2.02
MAP1LC3A-201ENST00000360668 ZNF521Q96K83 1311 aa27.7■■■□□ 2.02
MAP1LC3A-201ENST00000360668 XPCQ01831 940 aaPredicted RBP27.69■■■□□ 2.02
MAP1LC3A-201ENST00000360668 NCBP3Q53F19 620 aaKnown RBP27.69■■■□□ 2.02
MAP1LC3A-201ENST00000360668 SOX12O15370 315 aa27.69■■■□□ 2.02
MAP1LC3A-201ENST00000360668 FLT4P35916 1363 aa27.68■■■□□ 2.02
MAP1LC3A-201ENST00000360668 FCHSD2O94868 740 aa27.68■■■□□ 2.02
MAP1LC3A-201ENST00000360668 PLEKHF1Q96S99 279 aa27.68■■■□□ 2.02
MAP1LC3A-201ENST00000360668 ALS2Q96Q42 1657 aa27.67■■■□□ 2.02
MAP1LC3A-201ENST00000360668 NFAT5O94916 1531 aa27.67■■■□□ 2.02
MAP1LC3A-201ENST00000360668 SLIT3O75094 1523 aa27.66■■■□□ 2.02
MAP1LC3A-201ENST00000360668 TCP11L2Q8N4U5 519 aa27.66■■■□□ 2.02
MAP1LC3A-201ENST00000360668 KCNH5Q8NCM2 988 aa27.66■■■□□ 2.02
MAP1LC3A-201ENST00000360668 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
MAP1LC3A-201ENST00000360668 ROBO1Q9Y6N7 1651 aa27.64■■■□□ 2.02
MAP1LC3A-201ENST00000360668 PXDNQ92626 1479 aa27.64■■■□□ 2.02
MAP1LC3A-201ENST00000360668 USP19O94966 1318 aa27.64■■■□□ 2.01
MAP1LC3A-201ENST00000360668 AMPHP49418 695 aa27.64■■■□□ 2.01
MAP1LC3A-201ENST00000360668 EIF4A2Q14240 407 aaKnown RBP27.64■■■□□ 2.01
MAP1LC3A-201ENST00000360668 RTL1A6NKG5 1358 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms