RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KINO60870 393 aaKnown RBP21.96■■□□□ 1.11
SHANK1-202ENST00000359082 FILIP1LQ4L180 1135 aa21.96■■□□□ 1.11
SHANK1-202ENST00000359082 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
SHANK1-202ENST00000359082 CLASRPQ8N2M8 674 aaKnown RBP21.96■■□□□ 1.11
SHANK1-202ENST00000359082 CCDC7Q96M83 1385 aa21.95■■□□□ 1.11
SHANK1-202ENST00000359082 SPC24Q8NBT2 197 aa21.95■■□□□ 1.1
SHANK1-202ENST00000359082 RDXP35241 583 aaKnown RBP21.95■■□□□ 1.1
SHANK1-202ENST00000359082 TRAK2O60296 914 aa21.95■■□□□ 1.1
SHANK1-202ENST00000359082 NLRP6P59044 892 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 SYCP1Q15431 976 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 NEK4P51957 841 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 WWC2Q6AWC2 1192 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 SLC3A2P08195 630 aaKnown RBP21.94■■□□□ 1.1
SHANK1-202ENST00000359082 STK3Q13188 491 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 MAP4K4O95819 1239 aaPredicted RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CNTLNQ9NXG0 1405 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CUX1P39880 1505 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 TXLNAP40222 546 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CCAR1Q8IX12 1150 aaKnown RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CCDC191Q8NCU4 936 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 ZNF396Q96N95 335 aaPredicted RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 ATP2B2Q01814 1243 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 PAF1Q8N7H5 531 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 FIBPO43427 364 aa21.91■■□□□ 1.1
SHANK1-202ENST00000359082 CWC15Q9P013 229 aaKnown RBP21.91■■□□□ 1.1
SHANK1-202ENST00000359082 STK38Q15208 465 aa21.91■■□□□ 1.1
SHANK1-202ENST00000359082 GNAI3P08754 354 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 MTHFSP49914 203 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 ABTB2Q8N961 1025 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 HIP1O00291 1037 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 NOB1Q9ULX3 412 aaKnown RBP21.89■■□□□ 1.1
SHANK1-202ENST00000359082 AAMPQ13685 434 aa21.89■■□□□ 1.09
SHANK1-202ENST00000359082 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
SHANK1-202ENST00000359082 AXDND1Q5T1B0 1012 aaPredicted RBP21.89■■□□□ 1.09
SHANK1-202ENST00000359082 CCP110O43303 1012 aa21.88■■□□□ 1.09
SHANK1-202ENST00000359082 EXOSC9Q06265 439 aaKnown RBP21.88■■□□□ 1.09
SHANK1-202ENST00000359082 SERPINC1P01008 464 aa21.88■■□□□ 1.09
SHANK1-202ENST00000359082 SIL1Q9H173 461 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 ESCO1Q5FWF5 840 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 CDCA7LQ96GN5 454 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 STRN4Q9NRL3 753 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 PLCD4Q9BRC7 762 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 ZHX3Q9H4I2 956 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 ERC1Q8IUD2 1116 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 GNAI2P04899 355 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 NEFHP12036 1026 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 PLEKHO1Q53GL0 409 aaPredicted RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 MTERF4Q7Z6M4 381 aaKnown RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 SMG6Q86US8 1419 aaKnown RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 RBM10P98175 930 aaKnown RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 TSPYL1Q9H0U9 437 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 MBD3O95983 291 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 IGF1RP08069 1367 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 PPP1R1BQ9UD71 204 aaPredicted RBP21.84■■□□□ 1.09
SHANK1-202ENST00000359082 CCDC69A6NI79 296 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 ANKRD62A6NC57 917 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHANK1-202ENST00000359082 ZNHIT6Q9NWK9 470 aaKnown RBP21.83■■□□□ 1.09
SHANK1-202ENST00000359082 RABEP1Q15276 862 aa21.83■■□□□ 1.09
SHANK1-202ENST00000359082 LEKR1Q6ZMV7 388 aa21.83■■□□□ 1.08
SHANK1-202ENST00000359082 DEF6Q9H4E7 631 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
SHANK1-202ENST00000359082 TSR2Q969E8 191 aaKnown RBP21.82■■□□□ 1.08
SHANK1-202ENST00000359082 PDCL3Q9H2J4 239 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 PDCP20941 246 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 NUP133Q8WUM0 1156 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 CYP46A1Q9Y6A2 500 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 ERLIN2O94905 339 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 MCM2P49736 904 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 PIP4K2AP48426 406 aaPredicted RBP21.81■■□□□ 1.08
SHANK1-202ENST00000359082 MPNDQ8N594 471 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 TNMDQ9H2S6 317 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 BRD4O60885 1362 aaPredicted RBP21.81■■□□□ 1.08
SHANK1-202ENST00000359082 SLC4A2P04920 1241 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 PPFIBP1Q86W92 1011 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 CCDC181Q5TID7 509 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
SHANK1-202ENST00000359082 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 CT47B1P0C2W7 299 aaPredicted RBP21.8■■□□□ 1.08
SHANK1-202ENST00000359082 MYL6BP14649 208 aa21.79■■□□□ 1.08
SHANK1-202ENST00000359082 ME1P48163 572 aa21.79■■□□□ 1.08
SHANK1-202ENST00000359082 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 940.1 ms