RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KINO60870 393 aaKnown RBP21.96■■□□□ 1.11
SHANK1-202ENST00000359082 FILIP1LQ4L180 1135 aa21.96■■□□□ 1.11
SHANK1-202ENST00000359082 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
SHANK1-202ENST00000359082 CLASRPQ8N2M8 674 aaKnown RBP21.96■■□□□ 1.11
SHANK1-202ENST00000359082 CCDC7Q96M83 1385 aa21.95■■□□□ 1.11
SHANK1-202ENST00000359082 SPC24Q8NBT2 197 aa21.95■■□□□ 1.1
SHANK1-202ENST00000359082 RDXP35241 583 aaKnown RBP21.95■■□□□ 1.1
SHANK1-202ENST00000359082 TRAK2O60296 914 aa21.95■■□□□ 1.1
SHANK1-202ENST00000359082 NLRP6P59044 892 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 SYCP1Q15431 976 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 NEK4P51957 841 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 WWC2Q6AWC2 1192 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 SLC3A2P08195 630 aaKnown RBP21.94■■□□□ 1.1
SHANK1-202ENST00000359082 STK3Q13188 491 aa21.94■■□□□ 1.1
SHANK1-202ENST00000359082 MAP4K4O95819 1239 aaPredicted RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CNTLNQ9NXG0 1405 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CUX1P39880 1505 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 TXLNAP40222 546 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CCAR1Q8IX12 1150 aaKnown RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CCDC191Q8NCU4 936 aa21.93■■□□□ 1.1
SHANK1-202ENST00000359082 ZNF396Q96N95 335 aaPredicted RBP21.93■■□□□ 1.1
SHANK1-202ENST00000359082 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 ATP2B2Q01814 1243 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 PAF1Q8N7H5 531 aa21.92■■□□□ 1.1
SHANK1-202ENST00000359082 FIBPO43427 364 aa21.91■■□□□ 1.1
SHANK1-202ENST00000359082 CWC15Q9P013 229 aaKnown RBP21.91■■□□□ 1.1
SHANK1-202ENST00000359082 STK38Q15208 465 aa21.91■■□□□ 1.1
SHANK1-202ENST00000359082 GNAI3P08754 354 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 MTHFSP49914 203 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 ABTB2Q8N961 1025 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 HIP1O00291 1037 aa21.9■■□□□ 1.1
SHANK1-202ENST00000359082 NOB1Q9ULX3 412 aaKnown RBP21.89■■□□□ 1.1
SHANK1-202ENST00000359082 AAMPQ13685 434 aa21.89■■□□□ 1.09
SHANK1-202ENST00000359082 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
SHANK1-202ENST00000359082 AXDND1Q5T1B0 1012 aaPredicted RBP21.89■■□□□ 1.09
SHANK1-202ENST00000359082 CCP110O43303 1012 aa21.88■■□□□ 1.09
SHANK1-202ENST00000359082 EXOSC9Q06265 439 aaKnown RBP21.88■■□□□ 1.09
SHANK1-202ENST00000359082 SERPINC1P01008 464 aa21.88■■□□□ 1.09
SHANK1-202ENST00000359082 SIL1Q9H173 461 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 ESCO1Q5FWF5 840 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 CDCA7LQ96GN5 454 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 STRN4Q9NRL3 753 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 PLCD4Q9BRC7 762 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 ZHX3Q9H4I2 956 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
SHANK1-202ENST00000359082 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 ERC1Q8IUD2 1116 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 GNAI2P04899 355 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 NEFHP12036 1026 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 PLEKHO1Q53GL0 409 aaPredicted RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 MTERF4Q7Z6M4 381 aaKnown RBP21.86■■□□□ 1.09
SHANK1-202ENST00000359082 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
SHANK1-202ENST00000359082 SMG6Q86US8 1419 aaKnown RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 RBM10P98175 930 aaKnown RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 TSPYL1Q9H0U9 437 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
SHANK1-202ENST00000359082 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 MBD3O95983 291 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 IGF1RP08069 1367 aa21.85■■□□□ 1.09
SHANK1-202ENST00000359082 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 PPP1R1BQ9UD71 204 aaPredicted RBP21.84■■□□□ 1.09
SHANK1-202ENST00000359082 CCDC69A6NI79 296 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 ANKRD62A6NC57 917 aa21.84■■□□□ 1.09
SHANK1-202ENST00000359082 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHANK1-202ENST00000359082 ZNHIT6Q9NWK9 470 aaKnown RBP21.83■■□□□ 1.09
SHANK1-202ENST00000359082 RABEP1Q15276 862 aa21.83■■□□□ 1.09
SHANK1-202ENST00000359082 LEKR1Q6ZMV7 388 aa21.83■■□□□ 1.08
SHANK1-202ENST00000359082 DEF6Q9H4E7 631 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
SHANK1-202ENST00000359082 TSR2Q969E8 191 aaKnown RBP21.82■■□□□ 1.08
SHANK1-202ENST00000359082 PDCL3Q9H2J4 239 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 PDCP20941 246 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 NUP133Q8WUM0 1156 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 CYP46A1Q9Y6A2 500 aa21.82■■□□□ 1.08
SHANK1-202ENST00000359082 ERLIN2O94905 339 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 MCM2P49736 904 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 PIP4K2AP48426 406 aaPredicted RBP21.81■■□□□ 1.08
SHANK1-202ENST00000359082 MPNDQ8N594 471 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 TNMDQ9H2S6 317 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 BRD4O60885 1362 aaPredicted RBP21.81■■□□□ 1.08
SHANK1-202ENST00000359082 SLC4A2P04920 1241 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 PPFIBP1Q86W92 1011 aa21.81■■□□□ 1.08
SHANK1-202ENST00000359082 CCDC181Q5TID7 509 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
SHANK1-202ENST00000359082 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
SHANK1-202ENST00000359082 CT47B1P0C2W7 299 aaPredicted RBP21.8■■□□□ 1.08
SHANK1-202ENST00000359082 MYL6BP14649 208 aa21.79■■□□□ 1.08
SHANK1-202ENST00000359082 ME1P48163 572 aa21.79■■□□□ 1.08
SHANK1-202ENST00000359082 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms