RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 GOLGA6L10A6NI86 522 aa13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 KANK4Q5T7N3 995 aaPredicted RBP13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 CDC45O75419 566 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 UQCRHP07919 91 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 TXLNAP40222 546 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 FAM107BQ9H098 131 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 FILIP1LQ4L180 1135 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 RNF214Q8ND24 703 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 ZHX3Q9H4I2 956 aa13.68□□□□□ -0.22
SPTBN1-202ENST00000356805 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■■□ 21.3
SPTBN1-202ENST00000356805 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
SPTBN1-202ENST00000356805 MCM5P33992 734 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 PPM1FP49593 454 aaPredicted RBP13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 TAX1BP1Q86VP1 789 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 SLC3A2P08195 630 aaKnown RBP13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 PSMA5P28066 241 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 HMOX1P09601 288 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
SPTBN1-202ENST00000356805 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 CCDC192P0DO97 292 aa13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
SPTBN1-202ENST00000356805 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.23
SPTBN1-202ENST00000356805 SEPT11Q9NVA2 429 aaKnown RBP13.65□□□□□ -0.23
SPTBN1-202ENST00000356805 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.23
SPTBN1-202ENST00000356805 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
SPTBN1-202ENST00000356805 KIF6Q6ZMV9 814 aa13.64□□□□□ -0.23
SPTBN1-202ENST00000356805 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
SPTBN1-202ENST00000356805 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
SPTBN1-202ENST00000356805 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
SPTBN1-202ENST00000356805 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 APAF1O14727 1248 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 NEBLO76041 1014 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 ZNHIT6Q9NWK9 470 aaKnown RBP13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 FAM193AP78312 1265 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
SPTBN1-202ENST00000356805 UBTFL1P0CB47 393 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-202ENST00000356805 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
SPTBN1-202ENST00000356805 ATF3P18847 181 aa13.62□□□□□ -0.23
SPTBN1-202ENST00000356805 FAM177A1Q8N128 213 aaPredicted RBP13.62□□□□□ -0.23
SPTBN1-202ENST00000356805 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.232e-10■■■■□ 20.1
SPTBN1-202ENST00000356805 RBM10P98175 930 aaKnown RBP13.61□□□□□ -0.23
SPTBN1-202ENST00000356805 GBP3Q9H0R5 595 aa13.61□□□□□ -0.23
SPTBN1-202ENST00000356805 SERPINC1P01008 464 aa13.61□□□□□ -0.23
SPTBN1-202ENST00000356805 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
SPTBN1-202ENST00000356805 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
SPTBN1-202ENST00000356805 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
SPTBN1-202ENST00000356805 MCM4P33991 863 aa13.6□□□□□ -0.23
SPTBN1-202ENST00000356805 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
SPTBN1-202ENST00000356805 LUC7LQ9NQ29 371 aaKnown RBP13.6□□□□□ -0.23
SPTBN1-202ENST00000356805 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
SPTBN1-202ENST00000356805 DYNC1I1O14576 645 aa13.59□□□□□ -0.23
SPTBN1-202ENST00000356805 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
SPTBN1-202ENST00000356805 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.23
SPTBN1-202ENST00000356805 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.23
SPTBN1-202ENST00000356805 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 PPFIBP1Q86W92 1011 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 STIM1Q13586 685 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 ZNF396Q96N95 335 aaPredicted RBP13.58□□□□□ -0.24
SPTBN1-202ENST00000356805 STK3Q13188 491 aa13.57□□□□□ -0.24
SPTBN1-202ENST00000356805 GIMAP7Q8NHV1 300 aa13.57□□□□□ -0.24
SPTBN1-202ENST00000356805 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
SPTBN1-202ENST00000356805 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
SPTBN1-202ENST00000356805 JMYQ8N9B5 988 aa13.57□□□□□ -0.24
SPTBN1-202ENST00000356805 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 MCM3P25205 808 aa13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 STK38Q15208 465 aa13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 DESP17661 470 aa13.56□□□□□ -0.24
SPTBN1-202ENST00000356805 HIP1O00291 1037 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms