RNA–Protein interactions for RNA: ENST00000349241.6

PTK7-204, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 3,801 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-204ENST00000349241 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
PTK7-204ENST00000349241 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
PTK7-204ENST00000349241 HSCBQ8IWL3 235 aa16.37■□□□□ 0.21
PTK7-204ENST00000349241 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
PTK7-204ENST00000349241 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PTK7-204ENST00000349241 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
PTK7-204ENST00000349241 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
PTK7-204ENST00000349241 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
PTK7-204ENST00000349241 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
PTK7-204ENST00000349241 FCHSD2O94868 740 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 GNAI1P63096 354 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 NLRP6P59044 892 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 MADDQ8WXG6 1647 aa16.35■□□□□ 0.21
PTK7-204ENST00000349241 POLR1AO95602 1720 aaPredicted RBP16.34■□□□□ 0.21
PTK7-204ENST00000349241 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTK7-204ENST00000349241 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
PTK7-204ENST00000349241 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
PTK7-204ENST00000349241 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
PTK7-204ENST00000349241 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
PTK7-204ENST00000349241 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.21
PTK7-204ENST00000349241 GSE1Q14687 1217 aa16.33■□□□□ 0.21
PTK7-204ENST00000349241 NFE2L2Q16236 605 aa16.33■□□□□ 0.21
PTK7-204ENST00000349241 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.21
PTK7-204ENST00000349241 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
PTK7-204ENST00000349241 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
PTK7-204ENST00000349241 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
PTK7-204ENST00000349241 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
PTK7-204ENST00000349241 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
PTK7-204ENST00000349241 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
PTK7-204ENST00000349241 BRPF3Q9ULD4 1205 aa16.31■□□□□ 0.2
PTK7-204ENST00000349241 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
PTK7-204ENST00000349241 SPHKAPQ2M3C7 1700 aa16.31■□□□□ 0.2
PTK7-204ENST00000349241 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
PTK7-204ENST00000349241 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
PTK7-204ENST00000349241 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
PTK7-204ENST00000349241 TET3O43151 1660 aa16.29■□□□□ 0.2
PTK7-204ENST00000349241 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
PTK7-204ENST00000349241 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
PTK7-204ENST00000349241 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
PTK7-204ENST00000349241 STK31Q9BXU1 1019 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 SYNMO15061 1565 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 EFCAB6Q5THR3 1501 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
PTK7-204ENST00000349241 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
PTK7-204ENST00000349241 ABTB2Q8N961 1025 aa16.27■□□□□ 0.19
PTK7-204ENST00000349241 F6X3S4 739 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 FOXO3O43524 673 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 MAP3K4Q9Y6R4 1608 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
PTK7-204ENST00000349241 ACEP12821 1306 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 KIF1BO60333 1816 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
PTK7-204ENST00000349241 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
PTK7-204ENST00000349241 MYOM2P54296 1465 aa16.25■□□□□ 0.19
PTK7-204ENST00000349241 CEP152O94986 1710 aa16.25■□□□□ 0.19
PTK7-204ENST00000349241 SMARCA5O60264 1052 aaPredicted RBP16.25■□□□□ 0.19
PTK7-204ENST00000349241 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
PTK7-204ENST00000349241 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
PTK7-204ENST00000349241 INSRP06213 1382 aa16.25■□□□□ 0.19
PTK7-204ENST00000349241 TRIM6-TRIM34B2RNG4 842 aa16.24■□□□□ 0.19
PTK7-204ENST00000349241 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
PTK7-204ENST00000349241 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
PTK7-204ENST00000349241 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
PTK7-204ENST00000349241 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
PTK7-204ENST00000349241 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
PTK7-204ENST00000349241 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
PTK7-204ENST00000349241 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
PTK7-204ENST00000349241 NSD2O96028 1365 aa16.23■□□□□ 0.19
PTK7-204ENST00000349241 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
PTK7-204ENST00000349241 PPRC1Q5VV67 1664 aaKnown RBP16.22■□□□□ 0.19
PTK7-204ENST00000349241 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
PTK7-204ENST00000349241 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
PTK7-204ENST00000349241 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
PTK7-204ENST00000349241 ABCC3O15438 1527 aa16.22■□□□□ 0.19
PTK7-204ENST00000349241 RILPL2Q969X0 211 aa16.22■□□□□ 0.19
PTK7-204ENST00000349241 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
PTK7-204ENST00000349241 A0A0G2JS52 829 aa16.21■□□□□ 0.19
PTK7-204ENST00000349241 VAMP4O75379 141 aa16.21■□□□□ 0.19
PTK7-204ENST00000349241 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
PTK7-204ENST00000349241 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
PTK7-204ENST00000349241 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
PTK7-204ENST00000349241 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
PTK7-204ENST00000349241 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
PTK7-204ENST00000349241 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
PTK7-204ENST00000349241 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
PTK7-204ENST00000349241 PSME1Q06323 249 aa16.2■□□□□ 0.18
PTK7-204ENST00000349241 METP08581 1390 aa16.2■□□□□ 0.18
PTK7-204ENST00000349241 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
PTK7-204ENST00000349241 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
PTK7-204ENST00000349241 ESCO1Q5FWF5 840 aa16.19■□□□□ 0.18
PTK7-204ENST00000349241 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
PTK7-204ENST00000349241 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
PTK7-204ENST00000349241 LTKP29376 864 aa16.18■□□□□ 0.18
PTK7-204ENST00000349241 INO80Q9ULG1 1556 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms