RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 PRPF40AO75400 957 aaKnown RBP18.8■□□□□ 0.6
PPM1E-201ENST00000308249 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
PPM1E-201ENST00000308249 UBTFL1P0CB47 393 aaPredicted RBP18.8■□□□□ 0.6
PPM1E-201ENST00000308249 STK3Q13188 491 aa18.8■□□□□ 0.6
PPM1E-201ENST00000308249 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
PPM1E-201ENST00000308249 LUC7LQ9NQ29 371 aaKnown RBP18.8■□□□□ 0.6
PPM1E-201ENST00000308249 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
PPM1E-201ENST00000308249 RABEP1Q15276 862 aa18.8■□□□□ 0.6
PPM1E-201ENST00000308249 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
PPM1E-201ENST00000308249 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
PPM1E-201ENST00000308249 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPM1E-201ENST00000308249 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
PPM1E-201ENST00000308249 ERICH4A6NGS2 130 aa18.78■□□□□ 0.6
PPM1E-201ENST00000308249 LETM1O95202 739 aaPredicted RBP18.78■□□□□ 0.6
PPM1E-201ENST00000308249 MTERF4Q7Z6M4 381 aaKnown RBP18.78■□□□□ 0.6
PPM1E-201ENST00000308249 GIMAP7Q8NHV1 300 aa18.78■□□□□ 0.6
PPM1E-201ENST00000308249 NLRP2Q9NX02 1062 aa18.78■□□□□ 0.6
PPM1E-201ENST00000308249 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
PPM1E-201ENST00000308249 ZNF396Q96N95 335 aaPredicted RBP18.78■□□□□ 0.6
PPM1E-201ENST00000308249 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 MRE11P49959 708 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 STIM1Q13586 685 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 CCDC102AQ96A19 550 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 PSMD1Q99460 953 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 CCDC113Q9H0I3 377 aa18.77■□□□□ 0.6
PPM1E-201ENST00000308249 CDC45O75419 566 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 DESP17661 470 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 TTC39AQ5SRH9 613 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 CEP63Q96MT8 703 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
PPM1E-201ENST00000308249 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 NUP133Q8WUM0 1156 aa18.76■□□□□ 0.59
PPM1E-201ENST00000308249 TICAM2Q86XR7 235 aa18.75■□□□□ 0.59
PPM1E-201ENST00000308249 ANAPC15P60006 121 aa18.75■□□□□ 0.59
PPM1E-201ENST00000308249 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
PPM1E-201ENST00000308249 MAP2K1Q02750 393 aaPredicted RBP18.74■□□□□ 0.59
PPM1E-201ENST00000308249 CNNM1Q9NRU3 951 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 WDR70Q9NW82 654 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 ERLIN1O75477 346 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
PPM1E-201ENST00000308249 NEK4P51957 841 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 NFKBIBQ15653 356 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 CCDC91Q7Z6B0 441 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
PPM1E-201ENST00000308249 TRAK2O60296 914 aa18.73■□□□□ 0.59
PPM1E-201ENST00000308249 SURF6O75683 361 aaKnown RBP18.73■□□□□ 0.59
PPM1E-201ENST00000308249 SOGA3Q5TF21 947 aa18.73■□□□□ 0.59
PPM1E-201ENST00000308249 CFAP45Q9UL16 551 aa18.73■□□□□ 0.59
PPM1E-201ENST00000308249 ME1P48163 572 aa18.72■□□□□ 0.59
PPM1E-201ENST00000308249 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
PPM1E-201ENST00000308249 KIF6Q6ZMV9 814 aa18.72■□□□□ 0.59
PPM1E-201ENST00000308249 PANK1Q8TE04 598 aa18.71■□□□□ 0.59
PPM1E-201ENST00000308249 ZNF76P36508 570 aa18.71■□□□□ 0.59
PPM1E-201ENST00000308249 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
PPM1E-201ENST00000308249 STAMBPO95630 424 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 ZSCAN29Q8IWY8 852 aaPredicted RBP18.7■□□□□ 0.58
PPM1E-201ENST00000308249 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 TAF4BQ92750 862 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 TNMDQ9H2S6 317 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 DACH1Q9UI36 760 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 JAKMIP3Q5VZ66 844 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 TTC16Q8NEE8 873 aa18.7■□□□□ 0.58
PPM1E-201ENST00000308249 UBE4AQ14139 1066 aa18.69■□□□□ 0.58
PPM1E-201ENST00000308249 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
PPM1E-201ENST00000308249 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
PPM1E-201ENST00000308249 SLC26A8Q96RN1 970 aa18.69■□□□□ 0.58
PPM1E-201ENST00000308249 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 USP8P40818 1118 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 ERC1Q8IUD2 1116 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 PKNOX2Q96KN3 472 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.58
PPM1E-201ENST00000308249 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
PPM1E-201ENST00000308249 JMYQ8N9B5 988 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 GNAI1P63096 354 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 TRIM22Q8IYM9 498 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 COMMD10Q9Y6G5 202 aa18.68■□□□□ 0.58
PPM1E-201ENST00000308249 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
PPM1E-201ENST00000308249 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
PPM1E-201ENST00000308249 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
PPM1E-201ENST00000308249 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
PPM1E-201ENST00000308249 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
PPM1E-201ENST00000308249 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
PPM1E-201ENST00000308249 MBD3O95983 291 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 PDCP20941 246 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 USP5P45974 858 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
PPM1E-201ENST00000308249 ATF3P18847 181 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 BMP2KQ9NSY1 1161 aaPredicted RBP18.66■□□□□ 0.58
PPM1E-201ENST00000308249 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 RBM25P49756 843 aaKnown RBP18.66■□□□□ 0.58
PPM1E-201ENST00000308249 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
PPM1E-201ENST00000308249 GOPCQ9HD26 462 aa18.66■□□□□ 0.58
PPM1E-201ENST00000308249 CCDC192P0DO97 292 aa18.65■□□□□ 0.58
PPM1E-201ENST00000308249 SIL1Q9H173 461 aa18.65■□□□□ 0.58
PPM1E-201ENST00000308249 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
PPM1E-201ENST00000308249 TRIM21P19474 475 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms