RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 BMP2KLQ5H9B9 411 aa14.07□□□□□ -0.16
TRUB1-201ENST00000298746 CASC1Q6TDU7 716 aa14.07□□□□□ -0.16
TRUB1-201ENST00000298746 CHMP4BQ9H444 224 aaKnown RBP14.07□□□□□ -0.16
TRUB1-201ENST00000298746 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
TRUB1-201ENST00000298746 RBM27Q9P2N5 1060 aaKnown RBP14.07□□□□□ -0.16
TRUB1-201ENST00000298746 CLASP1Q7Z460 1538 aa14.06□□□□□ -0.16
TRUB1-201ENST00000298746 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
TRUB1-201ENST00000298746 CCDC27Q2M243 656 aa14.06□□□□□ -0.16
TRUB1-201ENST00000298746 SYNMO15061 1565 aa14.06□□□□□ -0.16
TRUB1-201ENST00000298746 ST18O60284 1047 aa14.05□□□□□ -0.16
TRUB1-201ENST00000298746 GGT6Q6P531 493 aa14.05□□□□□ -0.16
TRUB1-201ENST00000298746 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
TRUB1-201ENST00000298746 ZSCAN23Q3MJ62 389 aa14.05□□□□□ -0.16
TRUB1-201ENST00000298746 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
TRUB1-201ENST00000298746 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
TRUB1-201ENST00000298746 SYCE3A1L190 88 aa14.04□□□□□ -0.16
TRUB1-201ENST00000298746 PRIM1P49642 420 aaKnown RBP14.04□□□□□ -0.16
TRUB1-201ENST00000298746 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
TRUB1-201ENST00000298746 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
TRUB1-201ENST00000298746 RABEP1Q15276 862 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 ARHGEF5Q12774 1597 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 HMOX1P09601 288 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
TRUB1-201ENST00000298746 PPP1R9BQ96SB3 815 aa14.02□□□□□ -0.17
TRUB1-201ENST00000298746 MAP7D2Q96T17 732 aa14.02□□□□□ -0.17
TRUB1-201ENST00000298746 CHAMP1Q96JM3 812 aa14.02□□□□□ -0.17
TRUB1-201ENST00000298746 PKP1Q13835 747 aa14.01□□□□□ -0.17
TRUB1-201ENST00000298746 CSPP1Q1MSJ5 1256 aa14.01□□□□□ -0.17
TRUB1-201ENST00000298746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRUB1-201ENST00000298746 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
TRUB1-201ENST00000298746 ERVK-7P63135 1459 aa14□□□□□ -0.17
TRUB1-201ENST00000298746 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
TRUB1-201ENST00000298746 PRKAR2BP31323 418 aa14□□□□□ -0.17
TRUB1-201ENST00000298746 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
TRUB1-201ENST00000298746 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
TRUB1-201ENST00000298746 A0A0U1RQG5 324 aaPredicted RBP13.99□□□□□ -0.17
TRUB1-201ENST00000298746 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
TRUB1-201ENST00000298746 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
TRUB1-201ENST00000298746 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
TRUB1-201ENST00000298746 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
TRUB1-201ENST00000298746 CCDC39Q9UFE4 941 aa13.99□□□□□ -0.17
TRUB1-201ENST00000298746 LAMC1P11047 1609 aa13.99□□□□□ -0.17
TRUB1-201ENST00000298746 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
TRUB1-201ENST00000298746 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
TRUB1-201ENST00000298746 KIF2CQ99661 725 aa13.98□□□□□ -0.17
TRUB1-201ENST00000298746 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
TRUB1-201ENST00000298746 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
TRUB1-201ENST00000298746 ZHX1Q9UKY1 873 aaPredicted RBP13.98□□□□□ -0.17
TRUB1-201ENST00000298746 FBLN1P23142 703 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 DDIT3P35638 169 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 NEK4P51957 841 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 NOL7Q9UMY1 257 aaKnown RBP13.97□□□□□ -0.17
TRUB1-201ENST00000298746 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 ABCA8O94911 1581 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
TRUB1-201ENST00000298746 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
TRUB1-201ENST00000298746 TERF2IPQ9NYB0 399 aa13.96□□□□□ -0.17
TRUB1-201ENST00000298746 PTPRTO14522 1441 aa13.96□□□□□ -0.17
TRUB1-201ENST00000298746 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.17
TRUB1-201ENST00000298746 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
TRUB1-201ENST00000298746 SMARCA5O60264 1052 aaPredicted RBP13.96□□□□□ -0.18
TRUB1-201ENST00000298746 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.18
TRUB1-201ENST00000298746 ZNF445P59923 1031 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
TRUB1-201ENST00000298746 REC8O95072 547 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 TSPYL6Q8N831 410 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
TRUB1-201ENST00000298746 NOS1P29475 1434 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 AK9Q5TCS8 1911 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
TRUB1-201ENST00000298746 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
TRUB1-201ENST00000298746 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
TRUB1-201ENST00000298746 HDGFL2Q7Z4V5 671 aaPredicted RBP13.94□□□□□ -0.18
TRUB1-201ENST00000298746 ZNF830Q96NB3 372 aaPredicted RBP13.94□□□□□ -0.18
TRUB1-201ENST00000298746 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
TRUB1-201ENST00000298746 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 MTERF4Q7Z6M4 381 aaKnown RBP13.93□□□□□ -0.18
TRUB1-201ENST00000298746 ATP10AO60312 1499 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
TRUB1-201ENST00000298746 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 TSC1Q92574 1164 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
TRUB1-201ENST00000298746 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 OTUD7AQ8TE49 926 aaPredicted RBP13.92□□□□□ -0.18
TRUB1-201ENST00000298746 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 DYNC1I1O14576 645 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 HS1BP3Q53T59 392 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 UNC13BO14795 1591 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 MBD3O95983 291 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 GNAI1P63096 354 aa13.92□□□□□ -0.18
TRUB1-201ENST00000298746 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms