RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 FASTKD5Q7L8L6 764 aaKnown RBP8.71□□□□□ -1.01
CHD2-226ENST00000636881 PODNQ7Z5L7 613 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 CMC1Q7Z7K0 106 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 BRSK2Q8IWQ3 736 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 PPWD1Q96BP3 646 aaKnown RBP8.71□□□□□ -1.01
CHD2-226ENST00000636881 C12orf43Q96C57 262 aaKnown RBP8.71□□□□□ -1.01
CHD2-226ENST00000636881 CNPY3Q9BT09 278 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 YIPF2Q9BWQ6 316 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 DEFB129Q9H1M3 183 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 LHX5Q9H2C1 402 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 VPS45Q9NRW7 570 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 PIH1D1Q9NWS0 290 aaKnown RBP8.71□□□□□ -1.01
CHD2-226ENST00000636881 VPS28Q9UK41 221 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 SNX13Q9Y5W8 968 aa8.71□□□□□ -1.01
CHD2-226ENST00000636881 ARID2Q68CP9 1835 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 TMEM114B3SHH9 223 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 PSMD12O00232 456 aaPredicted RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 MATN2O00339 956 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 TRIM38O00635 465 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 XPOTO43592 962 aaKnown RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 PLA2G6O60733 806 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 GRAP2O75791 330 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 ENDOD1O94919 500 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 KRT19P08727 400 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 MPSTP25325 297 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 C21orf59P57076 290 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 GSTM4Q03013 218 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 SLC10A2Q12908 348 aaPredicted RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 PDK2Q15119 407 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 STILQ15468 1287 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 LSM12Q3MHD2 195 aaKnown RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 RAB6CQ53S08 254 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 LZTR1Q8N653 840 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 LRTOMTQ8WZ04 291 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 ISOC1Q96CN7 298 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 MARK4Q96L34 752 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 PDCD2LQ9BRP1 358 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 MRIQ9BWK5 157 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 RAB6CQ9H0N0 254 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 VPS33BQ9H267 617 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 SLC8A2Q9UPR5 921 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 PSAT1Q9Y617 370 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 MYO18AQ92614 2054 aaKnown RBP8.71□□□□□ -1.02
CHD2-226ENST00000636881 A0A087WXM4 84 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 TRIM13O60858 407 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 MAGEA3P43357 314 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 RAB15P59190 212 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 NIPAL4Q0D2K0 466 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 ZNF786Q8N393 782 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 HM13Q8TCT9 377 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 ZNF597Q96LX8 424 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 NPAS2Q99743 824 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 RMI1Q9H9A7 625 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 SNX15Q9NRS6 342 aa8.71□□□□□ -1.02
CHD2-226ENST00000636881 BMP10O95393 424 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 PRKCGP05129 697 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 MGAT1P26572 445 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 TCF7P36402 384 aaPredicted RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 GP5P40197 560 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 ATP1A4Q13733 1029 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 SPIDRQ14159 915 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 NAPRTQ6XQN6 538 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 CARM1Q86X55 608 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 PQLC3Q8N755 202 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 FAM47BQ8NA70 645 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 RANBP9Q96S59 729 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 PDLIM7Q9NR12 457 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 CDYLQ9Y232 598 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 H0YJX3 145 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 GPR25O00155 361 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 FBP2O00757 339 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 HDAC3O15379 428 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 NOL3O60936 208 aaKnown RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 E2F6O75461 281 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 ATG7O95352 703 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 PIGRP01833 764 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 TNNC2P02585 160 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 ALDH1B1P30837 517 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 HALP42357 657 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 NAMPTP43490 491 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 NAB1Q13506 487 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 ZBED5Q49AG3 693 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 STRIP1Q5VSL9 837 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 RWDD4Q6NW29 188 aaKnown RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 TTC33Q6PID6 262 aaPredicted RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 GPR180Q86V85 440 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 CCDC60Q8IWA6 550 aaPredicted RBP8.7□□□□□ -1.02
CHD2-226ENST00000636881 FIBCD1Q8N539 461 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 PCDH19Q8TAB3 1148 aa8.7□□□□□ -1.02
CHD2-226ENST00000636881 MCRS1Q96EZ8 462 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms