RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 HTRA4P83105 476 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 DSC1Q08554 894 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 COL9A2Q14055 689 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CCDC121Q6ZUS5 278 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 NLRP8Q86W28 1048 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ARHGEF19Q8IW93 802 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GJD3Q8N144 294 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 FBXL13Q8NEE6 735 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 MAIP1Q8WWC4 291 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 P3H4Q92791 437 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CYFIP2Q96F07 1278 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF845Q96IR2 970 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 TMEM237Q96Q45 408 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 RAD9AQ99638 391 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ACTR5Q9H9F9 607 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ZDHHC18Q9NUE0 388 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GOLGA6L7A0A1B0GV03 622 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CAPN9O14815 690 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SPOPO43791 374 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 MAFKO60675 156 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 DDHD2O94830 711 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CAPNS1P04632 268 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PDHA1P08559 390 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 COMTP21964 271 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CCND1P24385 295 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GBP2P32456 591 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SULT1E1P49888 294 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PPARDQ03181 441 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ADCY2Q08462 1091 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 BNIP1Q12981 228 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PDCD11Q14690 1871 aaKnown RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 MESDQ14696 234 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 LLGL1Q15334 1064 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 C9orf57Q5W0N0 161 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ADAT2Q7Z6V5 191 aaKnown RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF280BQ86YH2 543 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CCDC105Q8IYK2 499 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 GOT1L1Q8NHS2 421 aaPredicted RBP11.94□□□□□ -0.5
LINC00538-201ENST00000626109 TAS1R2Q8TE23 839 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SLC20A1Q8WUM9 679 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ASB12Q8WXK4 309 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ALG3Q92685 438 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 TLCD1Q96CP7 247 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PGM2Q96G03 612 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 TMEM175Q9BSA9 504 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 HPS4Q9NQG7 708 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 AGAP1Q9UPQ3 857 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 LRCH1Q9Y2L9 728 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
LINC00538-201ENST00000626109 PTPRSQ13332 1948 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 ATP5F1P24539 256 aaPredicted RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 OR1G1P47890 313 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 FNTAP49354 379 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 RWDD2BP57060 319 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 CENPCQ03188 943 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 GKAP1Q5VSY0 366 aaPredicted RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 ANGPTL8Q6UXH0 198 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 CPLX4Q7Z7G2 160 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 CEP97Q8IW35 865 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 TRIM42Q8IWZ5 723 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 TDHQ8IZJ6 230 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 PPM1KQ8N3J5 372 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 FIBCD1Q8N539 461 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 LRRC52Q8N7C0 313 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 ST13P5Q8NFI4 369 aaPredicted RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
LINC00538-201ENST00000626109 CABS1Q96KC9 395 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 SIX4Q9UIU6 781 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 SNX24Q9Y343 169 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 COQ4Q9Y3A0 265 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 PCDHA3Q9Y5H8 950 aa11.93□□□□□ -0.5
LINC00538-201ENST00000626109 TDRD15B5MCY1 1934 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 COL4A6Q14031 1691 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RIPK2O43353 540 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 DOK2O60496 412 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 VNN1O95497 513 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 AGTP01019 485 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 LAG3P18627 525 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PNPLA4P41247 253 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PEX5P50542 639 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CLCNKBP51801 687 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ARFIP1P53367 373 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 MYO1EQ12965 1108 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms