RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RAPGEF1Q13905 1077 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 COL9A2Q14055 689 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 ZNF776Q68DI1 518 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 RFWD3Q6PCD5 774 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 USP30Q70CQ3 517 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 FIBINQ8TAL6 211 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 MYO19Q96H55 970 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 ZSWIM1Q9BR11 485 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 ORAI3Q9BRQ5 295 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 FUCA2Q9BTY2 467 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 RSPH9Q9H1X1 276 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 PKD1L2Q7Z442 2459 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 DMXL2Q8TDJ6 3036 aa18.18■□□□□ 0.5
SHKBP1-203ENST00000594298 FREM2Q5SZK8 3169 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 LGALS16A8MUM7 142 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 FOXN3O00409 490 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 FBXO21O94952 628 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 LTFP02788 710 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 ATXN1LP0C7T5 689 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 UCHL3P15374 230 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 ACADSBP45954 432 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 RGS7P49802 495 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 TBX4P57082 545 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 UBXN1Q04323 297 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 ARID5BQ14865 1188 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 MFN1Q8IWA4 741 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 DHX40Q8IX18 779 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 KDM1BQ8NB78 822 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 DDX50Q9BQ39 737 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 STK33Q9BYT3 514 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 DKK4Q9UBT3 224 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 BTBD3Q9Y2F9 522 aa18.17■□□□□ 0.5
SHKBP1-203ENST00000594298 CACNA1GO43497 2377 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 PAPSS1O43252 624 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 TNFSF14O43557 240 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 FSBPO95073 299 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 ASLP04424 464 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 IGHV4-34P06331 123 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 GRK6P43250 576 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 CCT8P50990 548 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 NNTQ13423 1086 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 DRAP1Q14919 205 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 NADSYN1Q6IA69 706 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 FAM71AQ8IYT1 594 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 HJURPQ8NCD3 748 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 STK32AQ8WU08 396 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 FCRL2Q96LA5 508 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 NCKAP1Q9Y2A7 1128 aa18.16■□□□□ 0.5
SHKBP1-203ENST00000594298 TYW5A2RUC4 315 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 DFNA5O60443 496 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 FYNP06241 537 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 KRT9P35527 623 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 CTSKP43235 329 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 GPD2P43304 727 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 RPL34P49207 117 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 SNX16P57768 344 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 ST8SIA6P61647 398 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 SFSWAPQ12872 951 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 HNRNPA1L2Q32P51 320 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 KIAA0895LQ68EN5 471 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 DPY19L2P1Q6NXN4 242 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 GALNT15Q8N3T1 639 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 CLEC4CQ8WTT0 213 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 MRGPRX3Q96LB0 322 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 SERPINB11Q96P15 392 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 NAA15Q9BXJ9 866 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 HSD3B7Q9H2F3 369 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 TLR6Q9Y2C9 796 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 CEP83Q9Y592 693 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 FHOD1Q9Y613 1164 aa18.15■□□□□ 0.5
SHKBP1-203ENST00000594298 C10orf142B7Z368 130 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 H0Y8X5 98 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 PIK3R2O00459 728 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 VILLO15195 856 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 SART1O43290 800 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 RNASEH1O60930 286 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 CALCAP01258 141 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 CSKP41240 450 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 RACK1P63244 317 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 IQCB1Q15051 598 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 SYCP1Q15431 976 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 KCNT1Q5JUK3 1230 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 DENND1BQ6P3S1 775 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 LAYNQ6UX15 382 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 BEND5Q7L4P6 421 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 MDM1Q8TC05 714 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 DQX1Q8TE96 717 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 MYEOVQ96EZ4 313 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 SLC39A13Q96H72 371 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 NOX5Q96PH1 765 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms